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CAZyme Information: MGYG000001129_01628

You are here: Home > Sequence: MGYG000001129_01628

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_C sp000437255
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; Ruminococcus_C sp000437255
CAZyme ID MGYG000001129_01628
CAZy Family CBM4
CAZyme Description Cellulose 1,4-beta-cellobiosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
883 96023.8 4.1595
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001129 1878365 MAG China Asia
Gene Location Start: 75;  End: 2726  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.4 3.2.1.78

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH9 301 787 7.9e-119 0.9952153110047847
CBM4 32 174 2.3e-28 0.9841269841269841

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00759 Glyco_hydro_9 3.37e-89 304 785 2 373
Glycosyl hydrolase family 9.
cd02850 E_set_Cellulase_N 7.71e-30 212 295 2 86
N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others.
pfam02927 CelD_N 2.04e-26 212 290 3 83
Cellulase N-terminal ig-like domain.
PLN02909 PLN02909 2.10e-13 362 739 77 427
Endoglucanase
PLN02345 PLN02345 1.64e-11 362 737 39 425
endoglucanase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADU21576.1 0.0 4 883 7 904
CBL17684.1 1.24e-271 19 820 27 887
QTL97152.1 2.39e-254 30 789 38 802
QNU67291.1 1.51e-249 25 789 35 788
CUH93326.1 3.90e-247 27 789 41 790

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1UT9_A 1.58e-165 212 794 7 609
ChainA, CELLULOSE 1,4-BETA-CELLOBIOSIDASE [Acetivibrio thermocellus]
1RQ5_A 1.43e-163 212 789 7 604
ChainA, Cellobiohydrolase [Acetivibrio thermocellus]
3X17_A 1.28e-69 210 787 16 554
Crystalstructure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium],3X17_B Crystal structure of metagenome-derived glycoside hydrolase family 9 endoglucanase [uncultured bacterium]
6DHT_A 2.10e-68 211 789 17 564
Bacteroidesovatus GH9 Bacova_02649 [Bacteroides ovatus ATCC 8483]
4CJ0_A 1.82e-63 212 787 30 545
ChainA, ENDOGLUCANASE D [Acetivibrio thermocellus],4CJ1_A Chain A, ENDOGLUCANASE D [Acetivibrio thermocellus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A3DCH1 7.95e-204 4 789 4 811
Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celK PE=3 SV=1
P0C2S1 1.12e-203 4 789 4 811
Cellulose 1,4-beta-cellobiosidase OS=Acetivibrio thermocellus OX=1515 GN=celK PE=1 SV=1
Q05156 1.83e-158 17 791 16 744
Cellulase 1 OS=Streptomyces reticuli OX=1926 GN=cel1 PE=1 SV=1
P14090 2.94e-151 31 791 183 909
Endoglucanase C OS=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) OX=590998 GN=cenC PE=1 SV=2
P10476 6.58e-132 215 795 40 606
Endoglucanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=celA PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000572 0.998443 0.000215 0.000350 0.000224 0.000178

TMHMM  Annotations      download full data without filtering help

start end
7 29
854 873