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CAZyme Information: MGYG000001138_00890

You are here: Home > Sequence: MGYG000001138_00890

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp003469205
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003469205
CAZyme ID MGYG000001138_00890
CAZy Family CBM13
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
649 69931.92 4.432
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001138 2080195 MAG China Asia
Gene Location Start: 26172;  End: 28121  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001138_00890.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 508 646 6.3e-26 0.6808510638297872

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14200 RicinB_lectin_2 9.68e-19 557 634 13 89
Ricin-type beta-trefoil lectin domain-like.
NF035929 lectin_1 7.80e-13 512 646 714 836
lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor.
pfam14200 RicinB_lectin_2 9.45e-13 507 586 12 89
Ricin-type beta-trefoil lectin domain-like.
NF035930 lectin_2 1.58e-10 522 644 130 238
lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor.
cd00161 RICIN 1.59e-10 522 644 13 122
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZH69735.1 5.46e-278 1 568 1 559
ADQ05809.1 2.79e-09 245 379 937 1084
ADL41439.1 3.73e-09 245 379 1085 1232
ADQ03654.1 6.43e-09 245 379 1085 1232
BCS80083.1 6.43e-09 245 379 1085 1232

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.038288 0.852414 0.105714 0.002382 0.000641 0.000527

TMHMM  Annotations      download full data without filtering help

start end
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