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CAZyme Information: MGYG000001139_00580

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Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900757595
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900757595
CAZyme ID MGYG000001139_00580
CAZy Family PL12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
498 MGYG000001139_21|CGC1 56403.55 6.1025
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001139 2015191 MAG China Asia
Gene Location Start: 1614;  End: 3110  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001139_00580.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL12 301 429 1.3e-26 0.9710144927536232

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 1.27e-38 297 445 8 163
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
COG5360 COG5360 1.71e-19 23 374 62 396
Uncharacterized conserved protein, heparinase superfamily [Function unknown].
pfam16889 Hepar_II_III_N 1.15e-06 53 268 88 317
Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUO20838.1 9.12e-117 7 434 41 466
BAK43911.1 2.22e-111 16 451 57 497
QNU66806.1 2.11e-104 16 452 61 501
BCS56822.1 3.68e-93 16 483 57 530
BCA89078.1 5.46e-92 7 431 3 435

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

1.000060 0.000005 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001139_00580.