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CAZyme Information: MGYG000001156_00381
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | SFHK01 sp004556395 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; CAG-74; SFHK01; SFHK01 sp004556395 | |||||||||||
| CAZyme ID | MGYG000001156_00381 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1211; End: 2770 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 65 | 455 | 5.7e-52 | 0.9353846153846154 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 4.85e-39 | 43 | 519 | 82 | 509 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN03003 | PLN03003 | 5.71e-08 | 42 | 379 | 22 | 297 | Probable polygalacturonase At3g15720 |
| PLN02188 | PLN02188 | 5.73e-07 | 39 | 454 | 32 | 377 | polygalacturonase/glycoside hydrolase family protein |
| pfam00295 | Glyco_hydro_28 | 1.91e-05 | 240 | 334 | 112 | 233 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN02218 | PLN02218 | 1.52e-04 | 46 | 379 | 70 | 351 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AOZ96985.1 | 2.38e-133 | 6 | 513 | 3 | 528 |
| AWG23677.1 | 1.44e-44 | 41 | 518 | 25 | 472 |
| SDU05910.1 | 3.27e-41 | 32 | 518 | 11 | 456 |
| QUT90415.1 | 2.44e-40 | 36 | 517 | 17 | 450 |
| ALJ58472.1 | 2.44e-40 | 36 | 517 | 17 | 450 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 3.46e-22 | 44 | 421 | 45 | 414 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9LW07 | 8.81e-07 | 210 | 379 | 136 | 297 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
| P26216 | 3.26e-06 | 31 | 335 | 30 | 280 | Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1 |
| Q02096 | 6.31e-06 | 36 | 423 | 77 | 403 | Polygalacturonase OS=Persea americana OX=3435 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000066 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |