Species | Gemmiger sp900540775 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger sp900540775 | |||||||||||
CAZyme ID | MGYG000001157_01860 | |||||||||||
CAZy Family | GH28 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 12099; End: 13652 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH28 | 105 | 473 | 1.2e-76 | 0.9507692307692308 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG5434 | Pgu1 | 5.93e-95 | 12 | 450 | 12 | 468 | Polygalacturonase [Carbohydrate transport and metabolism]. |
pfam00295 | Glyco_hydro_28 | 6.22e-28 | 177 | 462 | 39 | 307 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
PLN02218 | PLN02218 | 3.35e-24 | 73 | 470 | 60 | 414 | polygalacturonase ADPG |
PLN03003 | PLN03003 | 4.25e-21 | 81 | 470 | 24 | 368 | Probable polygalacturonase At3g15720 |
PLN02793 | PLN02793 | 3.85e-19 | 169 | 397 | 126 | 342 | Probable polygalacturonase |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
ATP00558.1 | 4.85e-250 | 1 | 517 | 1 | 518 |
QIA43717.1 | 4.85e-250 | 1 | 517 | 1 | 518 |
AXB29658.1 | 2.79e-249 | 1 | 517 | 1 | 518 |
CBL00656.1 | 6.52e-248 | 1 | 517 | 1 | 518 |
AXA82452.1 | 8.76e-246 | 1 | 517 | 1 | 518 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3JUR_A | 1.83e-40 | 87 | 436 | 34 | 389 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
5OLP_A | 2.99e-31 | 87 | 458 | 51 | 425 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
1BHE_A | 1.51e-25 | 84 | 394 | 13 | 314 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
2UVE_A | 7.04e-24 | 46 | 433 | 115 | 549 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
4C2L_A | 4.89e-12 | 91 | 399 | 26 | 309 | Crystalstructure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P27644 | 2.77e-47 | 234 | 447 | 35 | 249 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
A7PZL3 | 1.22e-41 | 87 | 465 | 69 | 431 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
P15922 | 2.01e-25 | 51 | 433 | 115 | 525 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
P26509 | 1.16e-24 | 84 | 394 | 39 | 340 | Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1 |
P18192 | 1.58e-24 | 84 | 394 | 39 | 340 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.999758 | 0.000290 | 0.000005 | 0.000000 | 0.000000 | 0.000000 |
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