CAZyme Information: MGYG000001157_02529

Basic Information

• Species: Gemmiger sp900540775
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger sp900540775
• CAZyme ID: MGYG000001157_02529
• CAZy Family: GH136
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1493	MGYG000001157_125|CGC1	158294.73	4.487

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001157	2792015	MAG	Austria	Europe

• Gene Location: Start: 12638; End: 17119 Strand: +

Full Sequence      

MRNKRTLQRGLALLLAGGMALSNLGAVPVLAEEYDAAPETVQATPETAAEKVPDGALSEA
EAPLPEADLAEGSPAAETTAAPEIAVLADESAVAAVMAKAAPAEPDVKVGASIDFADVAG
LNDDLNGWTYSNGGGTTELVADAEMGQVLKMSRTSDGGETALIYDGLSITESDTRYVTVT
AEMKLDKDGYAHQYSIPYIFDNSGAVAYSLFTNDSAAKYQSHVNGKNTTDAGTLTTDTWQ
TVRMDIDMQSDTFRVSVDGVMSLRNAKARTATDNLQKIKFYADSWNRGTLYIKSVSVTAS
NTDPFAPHTTAATYYVSPNGDDSKDGKTEQTAWKTIARVNQDTYIPGDKILFERGGEWEN
TTLQPQGSGSADAHITIGAYGDETKHMPRIAANGKVNDALYLYNQEYWEICNLDISNTVD
GCKMVAGDTNPTGNVTARDNSEGEKLGDYRGIHIAGRDVPSLQGFNIHNVRVHDVSGIVT
WIGDTGVRDAGIGNNYGFDGSKRTGGILIESLATTTNTPTIFSNITIADSEFVNNSFGGI
TIKQWNNGKGRDGSTGWANRNSAGGAPDYYDPNWKPHTNILITGNYINQGASAYACNGIY
LCGVKDSVVEKNLLEHIGTCGIELFFADNVAIQYNEVFDVRHKGGGQDSNAIDPDWRATN
ILIQYNYVHDCGEGLLLCGMKFNSGIIRYNLIQDCLYSYVHYSMGGGYFQFSNNVFYRSK
DGNGTSNFDPWGGGTASYVNNVFYDGKGTGFGFSGGTSFSYKNNAYYGTPACWKDSSPIM
LSEDPFVGTAPSMSRLGNAATGALLEANGLMPKTGSALVAAGASTDATGTALTDGLFAKG
SRFNFTSLAKAYGSIVPMAATAYPVFDATDSNATLNTSYTHTAASTTAPTIGLFEVSMPE
DAVYLRGTVSDDVSPCSNAKITVTVNGKTVETTTNASGTYTITEGLTAGEATVTAVVEGR
DTLTKTITLAGGKVNILDIAVPMPAMPNAYSDTLISEAFDENAGALAFNTKATVADGRLA
LSPGNAASSYADFAAEIQSRTAVDFSFDFKYQNGTNKGGFQFRDSDGRLLFAMCVKTADG
GNTMRTPAAASLVGGTQMSEPKWVDHTADANKTYVVRVHADFEAGTVSYQLKDKATDKVV
LQELNIPTTAKNLARMYSSNWYQAKTQYIDNFVLTARSNEPEPVAVDKTALQKAIDANTC
KVETDYTAETWADFAKALADANAVLADENATQTQVDAAAKALTDAAAALKVKPTEEPKPT
VETKVVTDDLSDNNIPDSLKNVGYDTPEKITEKLKLESSKKLSSDNIVVYEVRLQVSTDG
INWVDATAEDFPKNGLEISFTLPNGITAETAAQYDFVVSHMKDSGEVELLTPALKDGKLV
VTVSSLSPFGISWKLKEQPKPSEEPKPTQAPTATPAPTAAPAASDASSNSGNSSGTTSAP
ASTAAPKATAAPTAPAAVIPQTADSFPLVLLAILALCSAAALTGLVICRKKEH

Enzyme Prediction     

No EC number prediction in MGYG000001157_02529.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH136	312	827	2.2e-89	0.9511201629327902

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13620	CarboxypepD_reg	1.24e-08	905	980	2	80	Carboxypeptidase regulatory-like domain.
pfam13229	Beta_helix	3.62e-07	476	674	1	140	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13715	CarbopepD_reg_2	2.68e-06	905	979	1	74	CarboxypepD_reg-like domain. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.
pfam13229	Beta_helix	5.71e-05	597	741	1	155	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
smart00634	BID_1	2.03e-04	901	967	18	92	Bacterial Ig-like domain (group 1).

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CBK93002.1	0.0	113	1188	45	1121
BBC61707.1	8.54e-98	307	725	74	470
BAL62976.1	8.54e-98	307	725	74	470
ABM10627.1	2.43e-94	254	1128	27	845
QDH21977.1	2.08e-90	314	694	53	417

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7V6M_A	2.59e-18	309	717	6	429	ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
5GQC_A	1.10e-17	313	694	19	428	Crystalstructure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_C Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_D Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_E Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_F Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_G Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_H Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQF_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQF_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum]
7V6I_A	1.65e-15	313	694	15	440	ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001158	0.997441	0.000573	0.000362	0.000258	0.000192

TMHMM  Annotations     

start	end
1466	1488