CAZyme Information: MGYG000001160_00198

Basic Information

• Species: CAG-274 sp000432155
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; CAG-274; CAG-274 sp000432155
• CAZyme ID: MGYG000001160_00198
• CAZy Family: PL9
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1303	MGYG000001160_2|CGC3	141526.3	4.7577

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001160	2196853	MAG	Austria	Europe

• Gene Location: Start: 207883; End: 211794 Strand: +

Full Sequence      

MKKRLVCFGLALAFSLSSFSAISFAEGSWKKGWTGKADAAAYTVNANGSTVTMSNDNVNN
GKFTDGEDSIVYYANELKADEDFELKATVNIDSYNTAKDGSNPQQGSVGIGVLDSLYNKT
DDKTYDDGVFLGSYASKKDSPMAIHSLVRANSSKKTVGDALSDTFANTGENLGTFDLSIK
KVGNAYTLTCGDKSTTVEMTAMEDEIYPCLYIARNAKATFTNVSLKTETRKATSLTLKGK
CKTAYSYGEKLDLSGLTGTVTYDDGTKEDVTGFLASGYDATKTGKQTITLSYGEAKANID
VSVANVALTDVKIGFTPVKTDYSLNGPFSSTGISVEAVYSDGTTKKLDSDQYTFSLNGKT
IKDGDAVTGIGHQIVKVNVKPQKGINTTAVGSYNIYINKNAYSSLEAKGKGFDTEYYLND
QFDTNTIEVTASYTNDSGKVVSEIVPAGSYTLTGFDSKTVGEKEVKVSAGGLDVSNTVTV
KEKQVTGIELTKYPKTTYNVGESFDKEDMAVVVKYDNGDEDELTDYTVNTDKFDTSKVGK
TSVTVSSKEGSVELPCTVVEAKDAKWRKVVFGQSSNYDKQDEGISGVTADDYGTVNGKIN
VRSWNGSGKITQDHDGISYYYTTVDGNEDFRVTADIKVNKYLEHDNNDTKRSGQEAFGIM
ARDVIPLTGEDGKIVTDESKAKKDSEGVSQPLDNGAVFASNMVICGGYSGTGYPADKSTK
DYDKIINMNRINLIVREGVTATDGGGKRIGPYAINSEFPKEGNTYRVTLERMNGGLYAKC
YDYQTGKTQTTVYNDDSFLTVQSDKVYVGFFTSRWADIDVSNVEFRTSDRSTDQKVAEKE
EEPATAGISFKTKGYSTSENYGFDLATSDSKGKVTIKVNDAVVAQNVDMADTQHFTAKLK
NDTANKIVAVYTPDKSLNLSSYEPIVVRKTVYCKETPANATTLYVSPQGSFNGDGTKENP
FDIDTAIGLCKAGQTIQLAGGVYNRTSRIDISIGDDGTAEKPKTIRADENDRAIIDLGAT
CAGFYTGGNYWVFENMDVRNSGNNLKAFNLGGSHCVVRNCRFYDNRDTGFQISRIDDDQT
REFWPGYNLIENCESFNNCDPAMINADGFGTKLTSGDGNVYRNCKSHHNLDDGWDCYTKV
NTGAIGAVTLENCQAYKMGLRLNEDGTETPYGAGGHNGFKMGGENIAVNHVLKNCVAYDN
LACGVTTNFNPSLTLIDVKAYNNAESNFNFFTDKADQYNYTVTGAVSYNGGAVDRIPTEN
YNKEYKNNSQTPLISDSNYWELALGKSVNKSGKEANESMLKMK

Enzyme Prediction     

No EC number prediction in MGYG000001160_00198.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL9	939	1283	2.2e-103	0.9146666666666666

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07523	Big_3	1.82e-07	242	303	4	67	Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.
cd14251	PL-6	2.33e-07	965	1093	9	133	Polysaccharide Lyase Family 6. Polysaccharide Lyase Family 6 is a family of beta-helical polysaccharide lyases. Members include alginate lyase (EC 4.2.2.3) and chondroitinase B (EC 4.2.2.19). Chondroitinase B is an enzyme that only cleaves the beta-(1,4)-linkage of dermatan sulfate (DS), leading to 4,5-unsaturated dermatan sulfate disaccharides as the product. DS is a highly sulfated, unbranched polysaccharide belonging to a family of glycosaminoglycans (GAGs) composed of alternating hexosamine (gluco- or galactosamine) and uronic acid (D-glucuronic or L-iduronic acid) moieties. DS contains alternating 1,4-beta-D-galactosamine (GalNac) and 1,3-alpha-L-iduronic acid units. The related chondroitin sulfate (CS) contains alternating GalNac and 1,3-beta-D-glucuronic acid units. Alginate lyases (known as either mannuronate (EC 4.2.2.3) or guluronate lyases (EC 4.2.2.11) catalyze the degradation of alginate, a copolymer of alpha-L-guluronate and its C5 epimer beta-D-mannuronate.
pfam07523	Big_3	7.44e-07	492	558	1	67	Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.
pfam14592	Chondroitinas_B	2.30e-04	959	1093	3	134	Chondroitinase B. This family includes chondroitinases. These enzymes cleave the glycosaminoglycan dermatan sulfate.
pfam07523	Big_3	0.003	413	480	4	67	Bacterial Ig-like domain (group 3). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in a variety of bacterial surface proteins.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ANW97669.1	1.95e-220	44	1297	59	1222
BAC87940.1	7.60e-220	44	1297	59	1222
AGI38277.1	1.50e-219	44	1297	59	1222
AGC67199.1	1.50e-219	44	1297	59	1222
ANX00231.1	2.11e-219	44	1297	59	1222

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1RU4_A	1.79e-27	944	1223	18	292	ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A	1.33e-11	942	1229	4	324	Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P22751	2.01e-57	566	1261	34	686	Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P0C1A6	3.05e-28	944	1282	43	371	Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7	1.43e-26	944	1223	43	317	Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000247	0.999050	0.000209	0.000179	0.000163	0.000146

TMHMM  Annotations     

start	end
5	27