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CAZyme Information: MGYG000001160_00501

You are here: Home > Sequence: MGYG000001160_00501

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-274 sp000432155
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; CAG-274; CAG-274 sp000432155
CAZyme ID MGYG000001160_00501
CAZy Family CBM77
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
824 MGYG000001160_11|CGC1 87550.37 5.2012
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001160 2196853 MAG Austria Europe
Gene Location Start: 486;  End: 2960  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001160_00501.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 420 797 3e-54 0.8186666666666667
CBM77 56 144 1.1e-18 0.8155339805825242

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam18283 CBM77 1.54e-17 56 151 17 108
Carbohydrate binding module 77. This domain is the non-catalytic carbohydrate binding module 77 (CBM77) present in Ruminococcus flavefaciens. CBMs fulfil a critical targeting function in plant cell wall depolymerisation. In CBM77, a cluster of conserved basic residues (Lys1092, Lys1107 and Lys1162) confer calcium-independent recognition of homogalacturonan.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBI14069.1 7.75e-179 212 824 33 606
CBZ48778.1 2.46e-177 212 824 33 606
BAK28435.1 2.46e-177 212 824 33 606
QKI00169.1 2.46e-177 212 824 33 606
QWX86240.1 2.46e-177 212 824 33 606

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 1.54e-14 495 756 106 298
ChainA, Pectate lyase [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1A6 1.34e-14 405 756 47 323
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 9.87e-14 495 756 131 323
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000494 0.185436 0.813735 0.000123 0.000119 0.000083

TMHMM  Annotations      download full data without filtering help

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