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CAZyme Information: MGYG000001217_00273

You are here: Home > Sequence: MGYG000001217_00273

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Firm-10 sp004552515
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; CAG-74; Firm-10; Firm-10 sp004552515
CAZyme ID MGYG000001217_00273
CAZy Family GH110
CAZyme Description Alpha-1,3-galactosidase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
562 MGYG000001217_17|CGC1 63719.04 5.8529
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001217 2504977 MAG Austria Europe
Gene Location Start: 5190;  End: 6878  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001217_00273.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH110 3 557 2.3e-148 0.9945255474452555

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 3.35e-05 406 527 10 133
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229 Beta_helix 0.002 421 527 2 109
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
PRK05964 PRK05964 0.004 180 235 12 61
adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SDS24258.1 4.49e-114 2 562 29 586
QHI69936.1 2.84e-98 11 558 6 549
QOY89544.1 5.17e-98 15 556 37 569
QUT74394.1 1.11e-97 7 557 9 549
EDM26187.1 1.22e-93 2 556 24 578

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 1.53e-87 2 526 27 564
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 8.29e-87 2 526 27 564
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q89ZX0 3.83e-81 2 553 27 577
Alpha-1,3-galactosidase B OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaB PE=3 SV=1
B1KD83 3.80e-78 3 527 33 550
Alpha-1,3-galactosidase A OS=Shewanella woodyi (strain ATCC 51908 / MS32) OX=392500 GN=glaA PE=3 SV=1
B2UNU8 1.52e-73 16 553 233 762
Alpha-1,3-galactosidase B OS=Akkermansia muciniphila (strain ATCC BAA-835 / DSM 22959 / JCM 33894 / BCRC 81048 / CCUG 64013 / CIP 107961 / Muc) OX=349741 GN=glaB PE=3 SV=1
Q5L7M8 9.10e-71 24 526 48 548
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaA PE=3 SV=1
Q64MU6 6.71e-70 24 526 48 548
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000054 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001217_00273.