CAZyme Information: MGYG000001219_00062

Basic Information

• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CAG-56
• CAZyme ID: MGYG000001219_00062
• CAZy Family: GH136
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
572		62317.7	4.8595

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001219	2541038	MAG	Austria	Europe

• Gene Location: Start: 21207; End: 22925 Strand: +

Full Sequence      

MKKRALAFLCGLAVMGTSQNYLPVSQVNTVCAAGSGTVYYISSTHGNNSQDGTSEKTAWE
TLDKLKKVKLQPGDQVLLERGSVFNGYIHLQDVHGTEDAPIKIGCYGSETAGRPVINGNS
QGIWYQDYKGQVDNQNHRNKGYVSSTILLYDVDFVEVENLEITNESDDFTYFKSALPNKN
VPETSGRIDRTGVAGIAKDGGTMQHVYLNNLYIHDVDGNIEDKHMNNGGIQMNVLPPENE
AATGVARYDDISVTNCYVKDVSRAGICVGYTYQHAKFNGAAISDENAQTYGHTNVLIEGN
YVQNAGNDAIVAMYSYQPLVQNNVADRAGADLAKYESYWQHLCAGVWPWKCKDAVFQYNE
VFDTVGDGNQDGQAWDIDYSDGTIYQYNYSHNNGGGCLMICLQEAYNGVFRYNISQNDLR
NLIHLATNPNGEIYNNVFYIGKNLSTKIFEGSGKANLKNNIFYNVSTSKASGETIVQANR
TFANNIFYGYNGVTLPTGAITSDPKFVDPGTGPTEANAGGSIHERSAFEGYKLQAGSPAI
NAGTPITGGTDRDFFGNAIGATPDIGAHEAQQ

Enzyme Prediction     

EC	3.2.1.140

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH136	36	569	4.2e-154	0.9959266802443992

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13229	Beta_helix	0.001	353	464	33	136	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam17161	DUF5123	0.003	433	512	3	97	Domain of unknown function (DUF5123).

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ARV05068.1	1.42e-139	36	567	34	576
QCT93619.1	2.08e-136	36	567	34	577
ADO52688.1	5.04e-135	29	570	26	614
BBA56588.1	1.51e-134	29	570	26	615
ADP35567.1	2.99e-134	29	570	60	648

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7V6M_A	1.66e-152	36	570	8	577	ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
5GQC_A	3.53e-142	29	570	10	597	Crystalstructure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_C Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_D Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_E Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_F Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_G Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_H Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQF_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQF_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum]
7V6I_A	2.72e-139	24	570	1	609	ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]
6KQT_A	2.92e-125	36	439	244	638	CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A	1.55e-121	36	439	244	638	CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001120	0.997916	0.000308	0.000227	0.000205	0.000197

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001219_00062.