Species | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CAG-56; | |||||||||||
CAZyme ID | MGYG000001219_00067 | |||||||||||
CAZy Family | GH136 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 31506; End: 34235 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH136 | 37 | 581 | 1.9e-159 | 0.9938900203665988 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
cd00063 | FN3 | 4.55e-11 | 592 | 682 | 1 | 93 | Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
smart00060 | FN3 | 1.66e-10 | 592 | 670 | 1 | 81 | Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
COG5492 | YjdB | 2.67e-10 | 757 | 894 | 179 | 318 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
pfam00041 | fn3 | 4.50e-09 | 594 | 677 | 2 | 85 | Fibronectin type III domain. |
smart00635 | BID_2 | 8.80e-08 | 759 | 823 | 2 | 73 | Bacterial Ig-like domain 2. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QCT93619.1 | 2.59e-186 | 37 | 582 | 34 | 579 |
ARV05068.1 | 3.16e-184 | 37 | 582 | 34 | 578 |
QOL32965.1 | 8.52e-177 | 40 | 568 | 3 | 542 |
QOL34407.1 | 8.46e-174 | 40 | 568 | 3 | 542 |
ADO52688.1 | 1.97e-153 | 29 | 580 | 25 | 611 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
7V6M_A | 2.24e-210 | 35 | 587 | 6 | 581 | ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis] |
7V6I_A | 2.71e-157 | 37 | 580 | 13 | 606 | ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967] |
5GQC_A | 1.18e-154 | 37 | 580 | 17 | 594 | Crystalstructure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_C Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_D Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_E Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_F Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_G Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_H Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQF_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQF_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum] |
6KQT_A | 1.54e-145 | 40 | 457 | 247 | 660 | CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099] |
6KQS_A | 4.29e-141 | 40 | 457 | 247 | 660 | CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099] |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.000364 | 0.998753 | 0.000328 | 0.000201 | 0.000179 | 0.000152 |
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