CAZyme Information: MGYG000001240_00409

Basic Information

• Species: Prevotella sp900557405
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900557405
• CAZyme ID: MGYG000001240_00409
• CAZy Family: PL1
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
928		99459.6	5.1665

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001240	2497614	MAG	Austria	Europe

• Gene Location: Start: 31149; End: 33935 Strand: -

Full Sequence      

MKKIQFILTLLFCMIVASANAQTWNFTSMSQADKDLCAKDANWLLGTDRYCYLPEISNAA
LTANGTELAYAKGLKFTAGVASDKIEGKAKIRINFGSNRLELNGTNVSLIVPGLKAGQKV
TVKCMTGKTGVARGLNASNLTPVSGSFNATSDAEQTNVGTVTADGDVLFSTSAGMYIYSV
EVAAAGGSDPVTPSAGNDVVMNLNKNQMRLTLASNDVKYYNTESLSSVDINGGNVIITPA
NGNTADEFNGNVSRIAFAKAKDSGQSGDINNPAGAIQISESKGWLESLYAKWAPFSGAES
YNVYCNDKKIDQQLVRLYPSYVRADVLGLAAGTYSIKVVAVDASGNEIEGSASTVTNLVV
KNYSREGFAQFKSGSTGIGAYNTDGTLKAGAKVFYVTAKTAKTIKTTVAGAGECTGIQAI
CDAYQKGQEKTPIAFRFIGLVKKSELDKVSSSEEGIQIKGKSAYSDMNITIEGVGDDATV
HGFGFLCRNASSVEFRNFAIMRCMDDCISMDTQNSKIWIHNMDFFYGPNGGGDHAKGDGT
VDLKGDSQYLTISYNRFWDTGKSSLCGMTSESQPNYITYQHNWFDHCDSRCPRIRTMSVH
VWNNYFDGVAKYGVGATTASSAFVESNYFRGTNKPMLISKQGSDVKNDPKGTFSGEDGGI
IKSFGNIFAEKSANYSYVTYQQDNTNFDAYEATSRDEQVPASVKALQGGSSYDNFDTNSS
LMYTYSADKAEEVPAVVTGFYGAGRINHGDFTWDFTGKDYEYAYDSALGSALDNYKTTLV
KVYGEGGCSTEAGSEGGSGSDGGGTTEPEKPDTPAGTILCTFTDKTPSTSMVRVTGNYAT
NKGTATIDGSAYTVCVKMESSTSIRFTLSESRKVTFYFADTETASLKINTVGKTSATSTY
TETLAAGDYEIKKKDARNLFGIKFETVE

Enzyme Prediction     

No EC number prediction in MGYG000001240_00409.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL1	462	631	1.1e-41	0.8316831683168316
CBM77	821	920	3e-19	0.9611650485436893

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3866	PelB	5.74e-53	327	747	1	345	Pectate lyase [Carbohydrate transport and metabolism].
pfam18283	CBM77	1.59e-31	816	922	1	108	Carbohydrate binding module 77. This domain is the non-catalytic carbohydrate binding module 77 (CBM77) present in Ruminococcus flavefaciens. CBMs fulfil a critical targeting function in plant cell wall depolymerisation. In CBM77, a cluster of conserved basic residues (Lys1092, Lys1107 and Lys1162) confer calcium-independent recognition of homogalacturonan.
smart00656	Amb_all	3.35e-26	468	629	17	186	Amb_all domain.
pfam00544	Pec_lyase_C	1.10e-13	468	629	35	211	Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QNT67442.1	1.57e-281	199	927	31	776
QCD40816.1	1.18e-222	208	783	1	588
QCP73706.1	1.18e-222	208	783	1	588
QUT73893.1	3.27e-222	273	922	20	679
QOR20273.1	1.96e-191	266	775	40	551

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3VMV_A	1.70e-25	459	629	72	246	Crystalstructure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5]
1VBL_A	2.08e-16	464	629	129	330	Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
5FU5_A	4.64e-14	815	928	5	117	Thecomplexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition [Ruminococcus flavefaciens]
3ZSC_A	1.11e-13	470	614	71	221	Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]
1AIR_A	1.69e-12	450	745	76	342	ChainA, PECTATE LYASE C [Dickeya chrysanthemi],1O88_A Chain A, Pectate Lyase C [Dickeya chrysanthemi],1O8D_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8E_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8F_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8G_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8H_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8I_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8J_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8K_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8L_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8M_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1PLU_A Chain A, Protein (pectate Lyase C) [Dickeya chrysanthemi],2PEC_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
B1B6T1	4.24e-20	415	637	67	280	Pectate trisaccharide-lyase OS=Bacillus sp. OX=1409 GN=pel PE=1 SV=1
Q8GCB2	4.24e-20	415	637	67	280	Pectate trisaccharide-lyase OS=Bacillus licheniformis OX=1402 GN=pelA PE=1 SV=1
Q65DC2	4.24e-20	415	637	67	280	Pectate trisaccharide-lyase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=BLi04129 PE=3 SV=1
B0XT32	7.17e-17	444	648	69	277	Probable pectate lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyA PE=3 SV=1
Q4WIT0	7.17e-17	444	648	69	277	Probable pectate lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000255	0.999041	0.000212	0.000157	0.000152	0.000143

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001240_00409.