CAZyme Information: MGYG000001240_00476

Basic Information

• Species: Prevotella sp900557405
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900557405
• CAZyme ID: MGYG000001240_00476
• CAZy Family: GT2
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1275	MGYG000001240_9|CGC1	144249.64	5.815

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001240	2497614	MAG	Austria	Europe

• Gene Location: Start: 53011; End: 56838 Strand: +

Full Sequence      

MIIKSDCFLPCTDFAEIESTLTQLRECRAVKHINLLVSEEFAKNNVAPKGCTMIVVDNIQ
SSAAICSIADNVDCEYALLYTKATPLTIGLYAIRRMLRVAVETDAEMIYSDHYSVENGVT
VAHPVIDYQAGSLRDDFDFGSVIVIKAKTLKEYAAANAGKEYRFAGLYDLRLFLSRKGSI
FHINEFLYTEEESDTRTSGEKQFDYVNPRNREVQIEMEKAVTEHLKAVGAFIDTAYYETP
DFNEQTFDCEASVIIPVRNREKTICDAVDSALSQKTKFKFNVIVVDNHSTDKTTELLAGY
AKKEEQGDGKPRLIHIIPNRNDLGIGGCWNVAVNDRHCGRFAVQLDSDDLYSSPNTLQAI
VDEFHKQHAAMIIGSYRMCDFDLNTLPPGLIDHAEWTDDNGCNNALRINGLGAPRAFFTP
LVRQILFPNTSYGEDYAMALAFCRRYKIGRIFSELYLCRRWGGNSDAALSIEKVNANNLY
KDRLRTMELSARQMVMKGKTDFMDDNSLHRFFNRQMEQWELARNNFRNLYNVEQRSLSID
GNTLRVQFNPARIVSTGARIDKKSIAKRPCFLCRKNRPEEQMTKIIDKDFEILVNPYPIL
PVHFTIPMRSHQPQAILGCYSEIHRILTSWPELVVFYNGPKCGASAPDHCHFQAGCSGFL
PIQTGWQRYSRNMTELYSTAEGDSISIINEYPTPALLIRSHSQKTDAELFKVVYKALPHT
PGDSEPMMNLVCWRTEDTFFTVVFARGKHRPDCYPQPEGAAEDASFMISPGALDMAGLII
TPRKEDFDRLTAEKAIAILKEVSLDDTQFQETAARIQSAAKKQSAISAICPKHHEPNVHV
GIVSGEKIEFSLNGEYSAKGETITGSQTVEFSEGGILWNGNQYRELCFSPKGEKASFSLF
DVTIGVNFHWERKETQTFLGELHLVVEADKICAINTLPVEKYLESVISSEMSATSSLELL
KAHAVISRSWLLAQMKKRKEVAESGNNFFSFIKQDDMFIRWYDREDHTIFDVCADDHCQR
YQGITKETSSHVAEAIKMTKGQILMYDDDICDARFSKCCGGVSEEFQYCWEDSPKPYLIA
VRDTREGMTQQGADALPDLRDEATAETWIRTSPESFCNTQDKKILSQVLNDYDQETADFY
RWHVTITQQKLKALIAEKLKMDFGDILDLKAIERGRSGRISKLQIIGTGRTFTIGKELEI
RRALSDTHLYSSAFVVDKEDVDADGVPQSFRLTGAGWGHGVGLCQIGAAMMGEQGFDYSQ
ILLHYYRNAEIKKIY

Enzyme Prediction     

No EC number prediction in MGYG000001240_00476.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT2	252	384	1.2e-18	0.7235294117647059

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16269	DUF4922	3.46e-95	619	810	1	188	Domain of unknown function (DUF4922). This family consists of uncharacterized proteins around 310 residues in length and is mainly found in various Bacteroides and Parabacteroides species. Several members are annotated as putative glycosyltransferases, but the specific function of this family is still unknown.
TIGR02669	SpoIID_LytB	1.72e-48	933	1273	2	267	SpoIID/LytB domain. This model describes a domain found typically in two or three proteins per genome in Cyanobacteria and Firmicutes, and sporadically in other genomes. One member is SpoIID of Bacillus subtilis. Another in B. subtilis is the C-terminal half of LytB, encoded immediately upstream of an amidase, the autolysin LytC, to which its N-terminus is homologous. Gene neighborhoods are not well conserved for members of this family, as many, such as SpoIID, are monocistronic. One early modelling-based study suggests a DNA-binding role for SpoIID, but the function of this domain is unknown. [Unknown function, General]
COG2385	SpoIID	3.23e-42	934	1274	139	393	Peptidoglycan hydrolase (amidase) enhancer domain [Cell wall/membrane/envelope biogenesis].
TIGR02870	spore_II_D	4.18e-33	933	1274	68	338	stage II sporulation protein D. Stage II sporulation protein D (SpoIID) is a protein of the endospore formation program in a number of lineages in the Firmicutes (low-GC Gram-positive bacteria). It is expressed in the mother cell compartment, under control of Sigma-E. SpoIID, along with SpoIIM and SpoIIP, is one of three major proteins involved in engulfment of the forespore by the mother cell. [Cellular processes, Sporulation and germination]
pfam08486	SpoIID	4.08e-28	927	1045	1	100	Stage II sporulation protein. This domain is found in the stage II sporulation protein SpoIID. SpoIID is necessary for membrane migration as well as for some of the earlier steps in engulfment during bacterial endospore formation. The domain is also found in amidase enhancer proteins. Amidases, like SpoIID, are cell wall hydrolases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QNT65264.1	0.0	4	1275	4	1259
BCS84357.1	0.0	4	1275	4	1252
QVJ80566.1	0.0	4	1275	4	1223
ADE82754.1	0.0	4	1275	4	1223
QYR11045.1	0.0	4	1275	3	1245

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5I1T_A	2.11e-09	906	1275	39	330	ChainA, Stage II sporulation protein D [Clostridioides difficile 630]
5TXU_A	2.46e-09	906	1275	63	354	ChainA, Stage II sporulation protein D [Clostridioides difficile 630]
4RWR_A	2.72e-07	922	1272	51	318	2.1Angstrom Crystal Structure of Stage II Sporulation Protein D from Bacillus anthracis [Bacillus anthracis],4RWR_B 2.1 Angstrom Crystal Structure of Stage II Sporulation Protein D from Bacillus anthracis [Bacillus anthracis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q02113	4.63e-12	943	1266	422	697	Amidase enhancer OS=Bacillus subtilis (strain 168) OX=224308 GN=lytB PE=1 SV=1
C0QYX7	1.46e-08	918	1271	88	351	Uncharacterized protein BHWA1_00569 OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) OX=565034 GN=BHWA1_00569 PE=1 SV=1
Q9FLP9	5.34e-07	648	819	232	391	GDP-L-galactose phosphorylase 2 OS=Arabidopsis thaliana OX=3702 GN=VTC5 PE=1 SV=1
P07372	1.58e-06	933	1273	71	331	Stage II sporulation protein D OS=Bacillus subtilis (strain 168) OX=224308 GN=spoIID PE=4 SV=1
P13251	8.65e-06	933	1273	72	332	Stage II sporulation protein D OS=Bacillus amyloliquefaciens OX=1390 GN=spoIID PE=4 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000072	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001240_00476.