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CAZyme Information: MGYG000001247_02049

You are here: Home > Sequence: MGYG000001247_02049

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1370 sp900542035
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UMGS1370; UMGS1370 sp900542035
CAZyme ID MGYG000001247_02049
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
521 MGYG000001247_18|CGC2 58593.61 4.8122
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001247 2761406 MAG Austria Europe
Gene Location Start: 9965;  End: 11530  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001247_02049.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 107 467 5.5e-72 0.9261538461538461

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.06e-94 9 489 9 517
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 1.09e-27 81 430 67 378
polygalacturonase ADPG
PLN03003 PLN03003 9.78e-27 68 406 15 312
Probable polygalacturonase At3g15720
pfam00295 Glyco_hydro_28 3.29e-26 164 385 33 239
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02793 PLN02793 1.20e-23 82 423 53 355
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ABX43097.1 3.50e-239 1 519 1 518
BCJ93649.1 2.54e-234 1 519 1 518
ACR72585.1 1.83e-217 1 519 1 518
BCJ96409.1 2.04e-216 1 518 1 516
QRP36832.1 4.99e-211 1 516 1 518

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 6.61e-39 82 454 28 401
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
5OLP_A 1.03e-32 84 380 47 355
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
2UVE_A 4.01e-25 47 434 116 536
Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica]
4MR0_A 4.48e-10 46 142 82 180
Crystalstructure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6],4MR0_B Crystal structure of PfbA, a surface adhesin of Streptococcus pneumoniae [Streptococcus pneumoniae R6]
3ZPP_A 2.22e-08 82 142 24 88
Structureof the Streptococcus pneumoniae surface protein and adhesin PfbA [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P27644 5.34e-50 214 477 14 278
Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1
A7PZL3 6.40e-50 87 460 68 424
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
Q9LW07 1.13e-27 68 405 15 311
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
P43212 2.35e-25 83 395 60 346
Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1
P48978 3.69e-25 53 430 72 408
Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999828 0.000199 0.000004 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001247_02049.