CAZyme Information: MGYG000001253_00753

Basic Information

• Species: Paramuribaculum sp001689535
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; Paramuribaculum; Paramuribaculum sp001689535
• CAZyme ID: MGYG000001253_00753
• CAZy Family: CBM9
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
682		78231.67	5.2148

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001253	2271514	MAG	Austria	Europe

• Gene Location: Start: 55431; End: 57479 Strand: +

Full Sequence      

MKRILTAALTAAVAAAAWAATPLVDKYEARLTEPRLYDAFRTTGKIKIDGKLNEADWAKA
VPTQPFVDIRGKGYPEPVKATWAKMMWDDENLYIGARLVEDNVIAKLSQRDTIIYHDNDF
EVFIDPDGDGQHYFEIENNAKGVVFDLMLDKPYRSGGSFFVPWDCQGLQLATWVDGTLNK
PSDTDKAWYVEMAIPFKALTRDFTDPRSLKTWRINFSRVEWLIPGQPEENWVWSPTGLVD
MHMPERWGFLRFVDAPVGSAQAAHDLTLDMDAYRLIWALFYAQLDARNKPNGFIRTADDF
MLTDKDKALLPQGGEISVDASNSTFNLAVTVPSRKEIYHLDQNGKFTISAEKPRVVKNWA
WTGFPKDRTNEQWSEWFKKLHDAGISAVLFEGYNEDVYRLCKEAGLEAHYWKWTMNRGEL
MDKHPEWYAVNRKGESSFDKPAYVGYYRFLCPSRPEVAEYLAEDYIKCANLPYVDGMHLD
YMRLPDVILPVSLWKNYGIEQTSEHPEYDYCYCEVCRAKFKEKTGRDPLEVQFPMEDQSW
INFRLDALTNVVKTIADRVHSEGKFLSSAVFPGPSMAKRMVRQDWGNWNLDAYFPMIYNG
FYNEGPEWIGRSVDEGVKALRGRGKLYCGVMAPDIQGEDFVKALDEAYGHGAAGISFFAG
PDDTQLRQLKDYMKKHNLVPAN

Enzyme Prediction     

No EC number prediction in MGYG000001253_00753.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM9	48	249	9.5e-37	0.978021978021978

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd09620	CBM9_like_3	8.40e-69	48	249	1	200	DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily may co-occur with various other domains.
cd09618	CBM9_like_2	9.84e-28	37	219	2	170	DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized subfamily are typically found at the N-terminus of longer proteins that lack additional annotation with domain footprints.
pfam06452	CBM9_1	1.78e-10	48	200	1	133	Carbohydrate family 9 binding domain-like. CBM9_1 is a C-terminal domain on bacterial xylanase proteins, and it is tandemly repeated in a number of family-members. The CBM9 module binds to amorphous and crystalline cellulose and a range of soluble di- and monosaccharides as well as to cello- and xylo- oligomers of different degrees of polymerization. Comparison of the glucose and cellobiose complexes during crystallisation reveals surprising differences in binding of these two substrates by CBM9-2. Cellobiose was found to bind in a distinct orientation from glucose, while still maintaining optimal stacking and electrostatic interactions with the reducing end sugar.
cd00005	CBM9_like_1	1.54e-08	44	200	7	137	DOMON-like type 9 carbohydrate binding module of xylanases. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. The CBM9 domain frequently occurs in tandem repeats; members found in this subfamily typically co-occur with glycosyl hydrolase family 10 domains and are annotated as endo-1,4-beta-xylanases. CBM9 from Thermotoga maritima xylanase 10A is reported to have specificity for polysaccharide reducing ends.
COG1649	YddW	4.57e-06	355	598	84	307	Uncharacterized lipoprotein YddW, UPF0748 family [Function unknown].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRP90424.1	0.0	20	678	27	685
AKA51642.1	0.0	20	678	27	685
CAH07622.1	0.0	20	678	27	685
QCT78438.1	0.0	20	678	27	685
CUA18365.1	0.0	20	678	27	685

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000554	0.998481	0.000239	0.000249	0.000239	0.000207

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001253_00753.