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CAZyme Information: MGYG000001261_02193

You are here: Home > Sequence: MGYG000001261_02193

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Caulobacter sp903900155
Lineage Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter; Caulobacter sp903900155
CAZyme ID MGYG000001261_02193
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
431 45869.64 6.9976
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001261 5012197 MAG Italy Europe
Gene Location Start: 224;  End: 1519  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.2

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 114 416 2e-100 0.9930555555555556

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
TIGR02474 pec_lyase 1.09e-105 114 418 1 290
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
pfam09492 Pec_lyase 3.00e-92 114 418 1 289
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
TIGR01787 squalene_cyclas 0.001 97 214 505 588
squalene/oxidosqualene cyclases. This family of enzymes catalyzes the cyclization of the triterpenes squalene or 2-3-oxidosqualene to a variety of products including hopene, lanosterol, cycloartenol, amyrin, lupeol, and isomultiflorenol.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADW70110.1 2.94e-179 4 431 7 435
AEU36651.1 2.73e-170 21 430 37 447
QHS52017.1 3.95e-164 11 428 10 429
BBF82548.1 1.98e-162 6 429 6 430
ADU15225.1 2.43e-162 6 428 12 435

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1R76_A 4.40e-147 21 426 1 406
ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A 1.37e-39 92 411 27 316
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 1.92e-38 92 411 27 316
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000427 0.998775 0.000184 0.000213 0.000192 0.000166

TMHMM  Annotations      download full data without filtering help

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