logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001265_03558

You are here: Home > Sequence: MGYG000001265_03558

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Methylobacterium sp002778835
Lineage Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylobacterium; Methylobacterium sp002778835
CAZyme ID MGYG000001265_03558
CAZy Family GT83
CAZyme Description Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
574 MGYG000001265_434|CGC1 59904.81 10.4319
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001265 4213059 MAG Italy Europe
Gene Location Start: 111;  End: 1835  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001265_03558.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT83 28 506 4.8e-97 0.8814814814814815

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1807 ArnT 3.69e-41 44 516 23 492
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].
PRK13279 arnT 1.67e-05 50 452 30 428
lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QTI80784.1 3.25e-99 34 565 18 548
QYC12562.1 3.11e-78 36 574 21 561
QYC09774.1 3.11e-78 36 574 21 561
AXE66036.1 1.06e-55 44 388 27 381
ABI78434.1 7.16e-54 44 388 27 381

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5EZM_A 2.84e-10 55 387 58 383
CrystalStructure of ArnT from Cupriavidus metallidurans in the apo state [Cupriavidus metallidurans CH34],5F15_A Crystal Structure of ArnT from Cupriavidus metallidurans bound to Undecaprenyl phosphate [Cupriavidus metallidurans CH34]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q3KCB9 8.56e-10 55 376 31 341
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 2 OS=Pseudomonas fluorescens (strain Pf0-1) OX=205922 GN=arnT2 PE=3 SV=1
B2VBI7 1.84e-08 55 361 31 327
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99) OX=465817 GN=arnT PE=3 SV=1
Q4ZSZ0 2.42e-08 55 361 33 327
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=arnT PE=3 SV=1
C5BDQ8 2.43e-08 43 361 22 327
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Edwardsiella ictaluri (strain 93-146) OX=634503 GN=arnT PE=3 SV=1
Q4K884 3.33e-08 55 379 64 377
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 2 OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=arnT2 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.959489 0.040273 0.000097 0.000031 0.000029 0.000084

TMHMM  Annotations      download full data without filtering help

start end
30 49
117 139
143 160
167 185
200 222
243 262
296 318
325 344
349 366
379 401
405 427
440 462