CAZyme Information: MGYG000001266_00183

Basic Information

• Species: Atlantibacter hermannii
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Atlantibacter; Atlantibacter hermannii
• CAZyme ID: MGYG000001266_00183
• CAZy Family: GH3
• CAZyme Description: Beta-glucosidase BoGH3B

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
765	MGYG000001266_1|CGC1	83677.13	5.4938

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001266	4363538	MAG	Italy	Europe

• Gene Location: Start: 214563; End: 216860 Strand: +

Full Sequence      

MKWLCSVGMAVSLALQPAYASSTFGEHPLTPEARDAFVTDLLTKMTVDEKIGQLRLISVG
PDNPKEAIRDMIQKSQVGAIFNTVTREDIRKMQDQVMELSRLKIPLFFAYDVVHGQRTVF
PISLGLASSFNLDAVKTVGRISAYEAADDGLNMTWAPMVDVSRDPRWGRVSEGFGEDTYL
TSIMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSMQRLFNDYMPPY
KAALDAGSGGVMVALNSLNGTPASSDSWLLKDLLRDEWGFKGITISDHGAIKELIKHGTA
ADPKDAVRVALKSGINMSMSDEYYSKYLPELVKSGEVTMEELDDAARHVLNVKYDMGLFN
DPYSHLGAKETDPQDTNAESRLHRQEAREVARESMVLLKNRLDTLPLKKSGTIALIGPLA
DSQRDVMGSWSAAGVVKQSVTLLSGIKSAVGDNGKVLYAKGANLTNDKDIIGFLNQYEPG
VAVDERSPQAMIDEAVETAKQADVVVLAVGEAQGMAHEASSRTDLTLPQSQRDLIAALKA
TGKPLVLVLMNGRPLALVKEDQQADAILETWYAGTEGGNAIADVLFGDYNPSGKLPMSFP
RSVGQIPVYYSHLNTGRPYNPEKPNKYTSRYFDEANGPLYPFGYGLSYTTFSVSDVKLSS
PTMPQNGNVTASVEVTNTGKREGATVVQMYLQDVTASMSRPVKELKGFNKVTLKPGETRT
VSFPIDINALKFWNQKLQYVAEPGKFNVYIGLDSARVKQGEFELQ

Enzyme Prediction     

EC	3.2.1.21	3.2.1.-	3.2.1.37

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	98	319	2.1e-65	0.9814814814814815

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK15098	PRK15098	0.0	1	765	1	765	beta-glucosidase BglX.
pfam00933	Glyco_hydro_3	1.54e-127	46	352	1	316	Glycosyl hydrolase family 3 N terminal domain.
COG1472	BglX	2.68e-116	45	452	1	389	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PLN03080	PLN03080	8.38e-86	87	726	64	743	Probable beta-xylosidase; Provisional
pfam01915	Glyco_hydro_3_C	1.65e-74	395	648	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QPS90493.1	0.0	1	765	1	765
QFH70688.1	0.0	1	765	1	765
QIU89654.1	0.0	1	765	1	765
VED79609.1	0.0	1	764	1	764
VEF97215.1	0.0	1	764	1	764

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6R5R_A	0.0	34	764	4	733	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5O_A	0.0	34	764	3	732	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5O_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5R_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5T_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5U_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5V_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5P_A	0.0	25	764	28	764	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5P_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
6R5I_A	0.0	34	764	3	732	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
5XXL_A	5.56e-228	30	765	6	752	Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P33363	0.0	1	764	1	764	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
Q56078	0.0	1	764	1	764	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
T2KMH0	2.24e-134	72	754	33	710	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
T2KMH9	1.17e-119	3	765	8	755	Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1
A7LXU3	2.41e-108	13	751	7	762	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000244	0.999105	0.000172	0.000156	0.000144	0.000136

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001266_00183.