logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000001268_00169

You are here: Home > Sequence: MGYG000001268_00169

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Rothia mucilaginosa_B
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Micrococcaceae; Rothia; Rothia mucilaginosa_B
CAZyme ID MGYG000001268_00169
CAZy Family GT25
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
272 MGYG000001268_9|CGC2 30758.99 6.6109
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001268 1847122 MAG Italy Europe
Gene Location Start: 15301;  End: 16119  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001268_00169.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT25 30 181 3.5e-21 0.7734806629834254

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd06532 Glyco_transf_25 8.39e-15 34 99 32 98
Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.
COG3306 COG3306 1.51e-11 29 256 31 250
Glycosyltransferase involved in LPS biosynthesis, GR25 family [Cell wall/membrane/envelope biogenesis].
pfam01755 Glyco_transf_25 6.77e-09 65 195 67 200
Glycosyltransferase family 25 (LPS biosynthesis protein). Members of this family belong to Glycosyltransferase family 25 This is a family of glycosyltransferases involved in lipopolysaccharide (LPS) biosynthesis. These enzymes catalyze the transfer of various sugars onto the growing LPS chain during its biosynthesis.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QXW98986.1 1.83e-173 1 272 1 273
ATF62810.1 5.25e-173 1 272 1 273
BAI65433.1 4.61e-172 1 272 61 333
ATF62809.1 1.37e-145 1 272 1 273
QXW98985.1 1.37e-145 1 272 1 273

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000056 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001268_00169.