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CAZyme Information: MGYG000001271_00903

You are here: Home > Sequence: MGYG000001271_00903

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA644 sp002299265
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; UBA644; UBA644; UBA644 sp002299265
CAZyme ID MGYG000001271_00903
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
988 MGYG000001271_4|CGC1 112922.63 4.5269
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001271 1995172 MAG Italy Europe
Gene Location Start: 134853;  End: 137819  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001271_00903.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 14 700 3e-60 0.8046116504854369

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 2.33e-07 175 398 402 616
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 1.23e-05 447 557 1 89
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGQ98299.1 1.11e-271 10 984 18 1049
QHI70076.1 2.18e-268 9 969 12 958
AJY74264.1 1.44e-259 9 982 15 1025
QTH42014.1 4.27e-257 1 986 8 1051
QOV18449.1 1.14e-241 1 982 20 1031

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000067 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001271_00903.