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CAZyme Information: MGYG000001275_01523

You are here: Home > Sequence: MGYG000001275_01523

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-485 sp900321585
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-485; CAG-485 sp900321585
CAZyme ID MGYG000001275_01523
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
471 MGYG000001275_25|CGC1 51848.78 5.2094
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001275 2994513 MAG Italy Europe
Gene Location Start: 8655;  End: 10070  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001275_01523.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 185 454 4.8e-45 0.7538461538461538

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 5.64e-19 153 448 115 477
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03010 PLN03010 1.49e-08 197 405 143 354
polygalacturonase
PLN02793 PLN02793 7.29e-07 214 370 180 330
Probable polygalacturonase
pfam00295 Glyco_hydro_28 4.60e-06 214 418 88 274
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 0.002 179 287 113 215
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQR16514.1 1.38e-217 7 471 2 465
ANU58578.2 1.44e-217 4 471 10 476
ANW95387.1 8.31e-65 34 468 45 498
ASV74723.1 1.66e-63 23 453 25 438
SCM55434.1 5.40e-61 1 462 1 467

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000011 0.010311 0.989689 0.000003 0.000005 0.000004

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001275_01523.