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CAZyme Information: MGYG000001279_02549

You are here: Home > Sequence: MGYG000001279_02549

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Pseudomonas_E fulva
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E fulva
CAZyme ID MGYG000001279_02549
CAZy Family GT2
CAZyme Description Linear gramicidin synthase subunit B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2370 258802.35 5.1135
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001279 4682858 MAG Italy Europe
Gene Location Start: 848;  End: 7960  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001279_02549.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK12316 PRK12316 0.0 4 599 4545 5149
peptide synthase; Provisional
PRK12316 PRK12316 0.0 2 1031 1995 3022
peptide synthase; Provisional
PRK12467 PRK12467 0.0 5 2356 1569 3944
peptide synthase; Provisional
PRK12316 PRK12316 0.0 2 2329 503 2793
peptide synthase; Provisional
PRK12467 PRK12467 0.0 1103 2123 1151 2190
peptide synthase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QND46664.1 5.83e-213 13 2213 1012 2784
BAZ00088.1 6.04e-207 5 2217 574 3417
BAZ75991.1 6.04e-207 5 2217 574 3417
BAY30132.1 4.75e-206 5 2238 574 3440
BAY90071.1 8.75e-205 6 2217 574 3408

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6MFZ_A 2.06e-173 4 2100 199 1804
Crystalstructure of dimodular LgrA in a condensation state [Brevibacillus parabrevis],6MFZ_B Crystal structure of dimodular LgrA in a condensation state [Brevibacillus parabrevis]
2VSQ_A 2.72e-161 1064 2215 7 1149
Structureof surfactin A synthetase C (SrfA-C), a nonribosomal peptide synthetase termination module [Bacillus subtilis]
6MFY_A 1.81e-153 4 2011 199 1715
Crystalstructure of a 5-domain construct of LgrA in the substrate donation state [Brevibacillus parabrevis],6MG0_A Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis],6MG0_B Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis]
5U89_A 2.24e-128 15 835 29 860
Crystalstructure of a cross-module fragment from the dimodular NRPS DhbF [Geobacillus sp. Y4.1MC1]
4D4G_A 1.03e-121 13 544 33 573
Understandingbi-specificity of A-domains [Planktothrix agardhii],4D4H_A Understanding bi-specificity of A-domains [Planktothrix agardhii],4D4I_A Understanding bi-specificity of A-domains [Planktothrix agardhii],4D56_A Understanding bi-specificity of A-domains [Planktothrix agardhii],4D57_A Understanding bi-specificity of A-domains [Planktothrix agardhii]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O68008 0.0 5 2214 4027 6232
Bacitracin synthase 3 OS=Bacillus licheniformis OX=1402 GN=bacC PE=3 SV=1
Q70LM4 0.0 13 2116 1520 3639
Linear gramicidin synthase subunit D OS=Brevibacillus parabrevis OX=54914 GN=lgrD PE=1 SV=1
O68006 0.0 15 2098 3154 5242
Bacitracin synthase 1 OS=Bacillus licheniformis OX=1402 GN=bacA PE=3 SV=1
Q9R9J0 0.0 3 2099 256 2351
Mycosubtilin synthase subunit B OS=Bacillus subtilis OX=1423 GN=mycB PE=3 SV=1
Q0VZ70 0.0 7 2228 477 3197
Chondramide synthase cmdD OS=Chondromyces crocatus OX=52 GN=cmdD PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000051 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001279_02549.