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CAZyme Information: MGYG000001279_02875
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pseudomonas_E fulva | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas_E; Pseudomonas_E fulva | |||||||||||
| CAZyme ID | MGYG000001279_02875 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | Linear gramicidin synthase subunit D | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3226; End: 6096 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK05691 | PRK05691 | 0.0 | 26 | 954 | 655 | 1572 | peptide synthase; Validated |
| PRK12316 | PRK12316 | 0.0 | 1 | 956 | 1 | 952 | peptide synthase; Provisional |
| PRK12316 | PRK12316 | 0.0 | 33 | 956 | 1528 | 2450 | peptide synthase; Provisional |
| PRK12316 | PRK12316 | 0.0 | 31 | 956 | 4072 | 4998 | peptide synthase; Provisional |
| PRK05691 | PRK05691 | 0.0 | 42 | 956 | 1723 | 2637 | peptide synthase; Validated |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QND46664.1 | 2.54e-189 | 34 | 956 | 1597 | 2528 |
| BAY90071.1 | 1.33e-179 | 44 | 956 | 2230 | 3148 |
| BAY30132.1 | 1.30e-177 | 44 | 956 | 2241 | 3159 |
| BAZ00088.1 | 1.10e-176 | 44 | 956 | 2239 | 3157 |
| BAZ75991.1 | 1.10e-176 | 44 | 956 | 2239 | 3157 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6P1J_A | 3.90e-210 | 48 | 954 | 4 | 914 | Thestructure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae],6P1J_B The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo2 serine module [Eleftheria terrae] |
| 6OYF_A | 5.24e-194 | 51 | 917 | 4 | 873 | Thestructure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module [Eleftheria terrae],6OZV_A The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module in complex with AMP [Eleftheria terrae],6P4U_A The structure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module in complex with Mg and AMP [Eleftheria terrae] |
| 6P3I_A | 2.44e-188 | 51 | 917 | 4 | 873 | Thestructure of condensation and adenylation domains of teixobactin-producing nonribosomal peptide synthetase Txo1 serine module in complex with Mg [Eleftheria terrae] |
| 6MFY_A | 6.86e-126 | 22 | 949 | 760 | 1658 | Crystalstructure of a 5-domain construct of LgrA in the substrate donation state [Brevibacillus parabrevis],6MG0_A Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis],6MG0_B Crystal structure of a 5-domain construct of LgrA in the thiolation state [Brevibacillus parabrevis] |
| 6MFZ_A | 1.31e-125 | 22 | 949 | 760 | 1658 | Crystalstructure of dimodular LgrA in a condensation state [Brevibacillus parabrevis],6MFZ_B Crystal structure of dimodular LgrA in a condensation state [Brevibacillus parabrevis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q70LM4 | 1.15e-197 | 23 | 956 | 3616 | 4537 | Linear gramicidin synthase subunit D OS=Brevibacillus parabrevis OX=54914 GN=lgrD PE=1 SV=1 |
| Q70LM5 | 6.57e-196 | 25 | 956 | 6212 | 7138 | Linear gramicidin synthase subunit C OS=Brevibacillus parabrevis OX=54914 GN=lgrC PE=3 SV=1 |
| Q70LM6 | 1.32e-194 | 40 | 956 | 3625 | 4537 | Linear gramicidin synthase subunit B OS=Brevibacillus parabrevis OX=54914 GN=lgrB PE=1 SV=1 |
| D9XF47 | 9.38e-187 | 14 | 956 | 8 | 941 | Phosphinothricin tripeptide synthase PhsC OS=Streptomyces viridochromogenes (strain DSM 40736 / JCM 4977 / BCRC 1201 / Tue 494) OX=591159 GN=phsC PE=1 SV=1 |
| Q0VZ70 | 2.09e-184 | 48 | 956 | 21 | 935 | Chondramide synthase cmdD OS=Chondromyces crocatus OX=52 GN=cmdD PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000068 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |