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CAZyme Information: MGYG000001288_01046

You are here: Home > Sequence: MGYG000001288_01046

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Veillonella dispar
Lineage Bacteria; Firmicutes_C; Negativicutes; Veillonellales; Veillonellaceae; Veillonella; Veillonella dispar
CAZyme ID MGYG000001288_01046
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
380 MGYG000001288_25|CGC1 42391.49 6.2377
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001288 1882142 MAG Italy Europe
Gene Location Start: 14818;  End: 15960  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001288_01046.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT19 3 358 3.6e-122 0.9943502824858758

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00025 lpxB 7.67e-142 1 373 2 374
lipid-A-disaccharide synthase; Reviewed
COG0763 LpxB 1.19e-118 1 376 2 381
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
pfam02684 LpxB 1.87e-92 3 359 1 363
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
TIGR00215 lpxB 4.61e-85 3 373 8 385
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK14089 PRK14089 1.93e-53 1 373 2 347
lipid-A-disaccharide synthase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBU36764.1 4.10e-272 1 380 1 380
BBU34833.1 4.10e-272 1 380 1 380
VEG93955.1 1.67e-271 1 380 1 380
CAB1276542.1 1.47e-265 1 380 1 380
SNU95574.1 2.96e-265 1 380 1 380

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8S_A 1.06e-57 1 357 7 365
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]
5W8N_A 5.80e-57 1 357 7 365
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q74AT9 6.59e-101 2 376 8 383
Lipid-A-disaccharide synthase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=lpxB PE=3 SV=1
Q39T49 1.93e-97 2 377 8 384
Lipid-A-disaccharide synthase OS=Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15) OX=269799 GN=lpxB PE=3 SV=1
Q2LVL8 3.73e-97 3 376 6 380
Lipid-A-disaccharide synthase OS=Syntrophus aciditrophicus (strain SB) OX=56780 GN=lpxB PE=3 SV=1
B3E4H8 7.47e-97 2 373 8 379
Lipid-A-disaccharide synthase OS=Trichlorobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) OX=398767 GN=lpxB PE=3 SV=1
Q3A550 7.15e-94 2 376 9 384
Lipid-A-disaccharide synthase OS=Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000057 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001288_01046.