CAZyme Information: MGYG000001293_01929

Basic Information

• Species: Lacticaseibacillus rhamnosus
• Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lacticaseibacillus; Lacticaseibacillus rhamnosus
• CAZyme ID: MGYG000001293_01929
• CAZy Family: CBM50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1200		128314.3	6.614

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001293	3010111	Isolate	not provided	not provided

• Gene Location: Start: 1993822; End: 1997424 Strand: -

Full Sequence      

MGTTKRRKFWTALTNNEHKVTLVHSKHHGWLAIGLTFFAMGTAGIALSSQGQVVHASDQQ
PATQQTATNQGRVWKVRPVSQIEAQIKASGTGSTNYNIQWGDTLSTISEALNHTGFTTSV
ARLAAINRIANVDLIYAGAKLSLQGSGDNATVTTQDVSGNNQTFNLNPAKPATLTPAQQA
EAKYTVVGGSTGGTSTGGASSAPAVTPNPGSTDKDALQKQLEAIQAAKDKAEAEKAAAEK
AQREAEAKLTALLNNENTETLAQLQAKRTAAQRAVDAAKAKVTATQEKLQAAQTAAQQAQ
TAADQTNAAVAAKQAAVDQSTAQVNSVTTQLSDLQNQLNTLADQVKTNPDSQSKVNETKA
QLAVAQQKLTSYEGQLADATTALTQAKQTASQAGQKLTAATQAVNAVKNEATTARNEFDQ
AETTLKALPASVTSQNSQEAETVKAQLADLKVKVNQLDTTIDTLNAQIATWQDRLATAQD
DAATAQTDLAAAKTKSEKVDTTDHQQTVEAAQTSVADAKKTLPTIYVPKNTDKKVTINKD
ENGQTLNNLDGYKLITAGTPVKSVQTSSNGDTITTYTTTNVYHKIAYQTVNKTVNVDQSG
NALTNTDGYTKVSVSRQVAESTDPKTGDVTTTVTLTTVWKKTETPTHTTVNKTVNVDQSG
KVLTSTDGYTEVSRSSKSEDTKDNAGNITTTVTTTIIWKKNETPTHTTVNKTVNVDQSGK
VLTSTDGYTEVSRSSKSEDTKDNAGNITTTVTTTIVWKKNETPTHTTVNKTVNVDQSGKV
LTSTAGYTEVSRSSKSEDTKDNAGNITTTVTTTIVWKKNEVTTPAIVNKTVNVDEAGNVL
TSVDNYSLVNSSKTSKEDPSSSTTTFTTTNVWKKNTDPNETIINKFVNVDDQGHELTSTD
GYDYIGGGSATSWLTTSDGHKTTTVTYTSTYHKPQAKTVTKEVDVDEGGNTLTDKTGYVK
ISSTPITTVSKDPNTWDTTTTITTKNVWRNVEAAGTIIGAIKSVNDATTQLIQTQIEKND
RKVSIEQAAQYTDKDLTMAVIKKFNVLINGEQKRTGHVQTSLTSDPKAYEMEAPRAVEVM
FKFSHTRPVNAPASGTEAVTYQKGEPYMSRNTENISISSLWKKDVDGSADKLSTLIAEAM
FKQYIVDERPENNHGETGGHYQNIINSGYKNIVIGVYVVDEGDFYAASTAVATGNDGTFN

Enzyme Prediction     

No EC number prediction in MGYG000001293_01929.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
TIGR02168	SMC_prok_B	6.66e-09	243	525	223	466	chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
COG1196	Smc	3.94e-08	216	501	671	926	Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning].
COG1196	Smc	4.40e-08	217	535	218	517	Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning].
TIGR02168	SMC_prok_B	1.31e-06	211	469	725	982	chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
PRK11281	PRK11281	2.68e-06	318	468	90	250	mechanosensitive channel MscK.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AUC01216.1	0.0	5	1200	4	1192
QOP55823.1	0.0	5	1200	4	1190
QKK93766.1	0.0	5	1200	4	1192
AWN84295.1	0.0	6	1200	5	1198
QDR75842.1	0.0	6	1200	5	1198

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.349526	0.638674	0.009693	0.000788	0.000477	0.000832

TMHMM  Annotations     

start	end
28	47