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CAZyme Information: MGYG000001296_00619
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Pediococcus acidilactici | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus acidilactici | |||||||||||
| CAZyme ID | MGYG000001296_00619 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 611650; End: 613071 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00877 | NLPC_P60 | 1.33e-32 | 371 | 466 | 3 | 98 | NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins. |
| COG0791 | Spr | 4.20e-24 | 371 | 470 | 89 | 195 | Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis]. |
| PRK13914 | PRK13914 | 1.40e-17 | 8 | 448 | 2 | 456 | invasion associated endopeptidase. |
| NF033742 | NlpC_p60_RipB | 1.02e-14 | 370 | 457 | 90 | 188 | NlpC/P60 family peptidoglycan endopeptidase RipB. |
| NF033741 | NlpC_p60_RipA | 3.41e-14 | 370 | 457 | 341 | 439 | NlpC/P60 family peptidoglycan endopeptidase RipA. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AZP90918.1 | 8.06e-205 | 1 | 473 | 1 | 473 |
| QHS03507.1 | 8.06e-205 | 1 | 473 | 1 | 473 |
| QOP72949.1 | 8.06e-205 | 1 | 473 | 1 | 473 |
| QAT20598.1 | 3.26e-204 | 1 | 473 | 1 | 473 |
| QHM52686.1 | 1.32e-203 | 1 | 473 | 1 | 473 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6B8C_A | 3.26e-29 | 371 | 469 | 42 | 139 | Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium] |
| 7CFL_A | 5.87e-14 | 371 | 467 | 28 | 129 | ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile] |
| 4XCM_A | 2.81e-12 | 370 | 465 | 127 | 220 | Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8] |
| 2K1G_A | 2.68e-11 | 370 | 450 | 19 | 99 | SolutionNMR structure of lipoprotein spr from Escherichia coli K12. Northeast Structural Genomics target ER541-37-162 [Escherichia coli K-12] |
| 2HBW_A | 5.46e-10 | 372 | 445 | 115 | 187 | ChainA, NLP/P60 protein [Trichormus variabilis ATCC 29413] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P13692 | 6.66e-25 | 371 | 469 | 416 | 513 | Protein P54 OS=Enterococcus faecium OX=1352 PE=3 SV=2 |
| Q2G0D4 | 2.20e-16 | 39 | 153 | 31 | 143 | Probable autolysin SsaALP OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=SAOUHSC_00671 PE=1 SV=1 |
| Q4L3C1 | 4.43e-14 | 11 | 154 | 4 | 143 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus haemolyticus (strain JCSC1435) OX=279808 GN=sle1 PE=3 SV=1 |
| O31852 | 4.55e-14 | 11 | 142 | 3 | 131 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1 |
| Q6GJK9 | 1.12e-13 | 11 | 153 | 3 | 144 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=sle1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000299 | 0.999012 | 0.000175 | 0.000198 | 0.000152 | 0.000134 |
