CAZyme Information: MGYG000001296_01348

Basic Information

• Species: Pediococcus acidilactici
• Lineage: Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus acidilactici
• CAZyme ID: MGYG000001296_01348
• CAZy Family: CBM50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
414	MGYG000001296_1|CGC22	44987.12	3.4695

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001296	1929633	Isolate	not provided	not provided

• Gene Location: Start: 1365108; End: 1366352 Strand: +

Full Sequence      

MNKKRVAGAALASALLFAPLTLQSATALADSFYTSQTNAERADITNWVANTSQEISNNLS
SQHIDVNNLHGDQYVIQWGDTLSGISNATGISVAKLAYDNRIQNIDLIYAGDVLVLNRDG
EVPSDWSYEGDGNYVAKTKVTINNFTDNSDHSVNIDVSPVSNKHIDNSDNSVKNEYESPK
DPQSDADDKSASASADNAAKESSEDADQLDETDFSDAIQDEIKDKLNLDDDQLTVDFTGK
DADDESDDTDSAYEDVDSDTDTDSDTDTDTLYDDDQSVSTGSDQLTEKNAKKLADKIVKQ
LKEDDKDKDVTDADEIELTITADDDDFTFNLSLTSDDDSDSDDTADSDEDSSDTDSESSD
DEDTASSEDEDRNADEDADTDSDEDSDSQDNESDDEDGDQAVDTNADVEDDDVE

Enzyme Prediction     

No EC number prediction in MGYG000001296_01348.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam01476	LysM	1.11e-06	74	116	1	42	LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
smart00257	LysM	1.87e-06	74	116	2	44	Lysin motif.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QHS02815.1	2.62e-146	1	306	1	306
QOP73621.1	1.06e-143	1	306	1	306
QYI94843.1	1.50e-143	1	306	1	306
QIO84531.1	1.50e-143	1	306	1	306
QJW85993.1	1.50e-143	1	306	1	306

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000321	0.998894	0.000181	0.000226	0.000186	0.000173

TMHMM  Annotations     

start	end
7	29