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CAZyme Information: MGYG000001298_02360

You are here: Home > Sequence: MGYG000001298_02360

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Listeria grayi
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Listeriaceae; Listeria; Listeria grayi
CAZyme ID MGYG000001298_02360
CAZy Family GH23
CAZyme Description Cell wall-binding protein YocH
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
244 MGYG000001298_2|CGC15 26083.21 10.3523
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001298 2589961 Isolate not provided Europe
Gene Location Start: 840841;  End: 841575  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001298_02360.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK06347 PRK06347 5.22e-22 17 134 398 538
1,4-beta-N-acetylmuramoylhydrolase.
PRK06347 PRK06347 1.32e-20 16 132 322 464
1,4-beta-N-acetylmuramoylhydrolase.
PRK06347 PRK06347 1.17e-19 17 119 472 591
1,4-beta-N-acetylmuramoylhydrolase.
PRK10783 mltD 8.44e-17 17 127 336 454
membrane-bound lytic murein transglycosylase D; Provisional
PRK13914 PRK13914 3.06e-14 1 175 3 192
invasion associated endopeptidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VEI36366.1 4.26e-135 1 244 1 244
AIS63665.1 5.48e-41 1 128 1 134
VEH48000.1 5.48e-41 1 128 1 134
AIS60839.1 5.48e-41 1 128 1 134
SNV48801.1 1.53e-40 1 130 1 136

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2MKX_A 9.62e-08 78 119 7 48
Solutionstructure of LysM the peptidoglycan binding domain of autolysin AtlA from Enterococcus faecalis [Enterococcus faecalis V583]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O31852 2.94e-21 1 126 1 138
D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1
O34669 1.24e-18 1 128 1 130
Cell wall-binding protein YocH OS=Bacillus subtilis (strain 168) OX=224308 GN=yocH PE=1 SV=1
P54421 3.03e-18 28 126 89 199
Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1
Q49UX4 6.97e-14 1 121 1 131
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=sle1 PE=3 SV=1
O07532 1.19e-13 28 121 177 285
Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000287 0.998895 0.000214 0.000210 0.000192 0.000157

TMHMM  Annotations      download full data without filtering help

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