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CAZyme Information: MGYG000001303_01456

You are here: Home > Sequence: MGYG000001303_01456

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_AP scindens
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Clostridium_AP; Clostridium_AP scindens
CAZyme ID MGYG000001303_01456
CAZy Family CBM32
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1022 MGYG000001303_18|CGC1 114256.89 4.1
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001303 3619905 Isolate not provided North America
Gene Location Start: 3225;  End: 6293  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001303_01456.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM32 178 298 8.9e-21 0.9274193548387096
CBM32 472 570 3.9e-16 0.8064516129032258

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 4.43e-19 178 297 4 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam02585 PIG-L 1.23e-12 597 669 1 79
GlcNAc-PI de-N-acetylase. Members of this family are related to PIG-L an N-acetylglucosaminylphosphatidylinositol de-N-acetylase (EC:3.5.1.89) that catalyzes the second step in GPI biosynthesis.
pfam00754 F5_F8_type_C 1.26e-12 469 566 1 110
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754 F5_F8_type_C 1.90e-12 310 428 1 114
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
COG2120 LmbE 6.86e-09 592 669 10 89
N-acetylglucosaminyl deacetylase, LmbE family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRO38183.1 0.0 1 1022 1 1022
QBF74995.1 0.0 1 1022 1 1022
QMW76217.1 3.54e-51 39 506 561 1091
QIB55915.1 3.54e-51 39 506 561 1091
QRO38181.1 1.88e-50 39 481 567 1075

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000364 0.998845 0.000194 0.000222 0.000183 0.000161

TMHMM  Annotations      download full data without filtering help

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