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CAZyme Information: MGYG000001303_01458

You are here: Home > Sequence: MGYG000001303_01458

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_AP scindens
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Clostridium_AP; Clostridium_AP scindens
CAZyme ID MGYG000001303_01458
CAZy Family GH136
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1425 MGYG000001303_18|CGC1 158238.92 4.1854
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001303 3619905 Isolate not provided North America
Gene Location Start: 7076;  End: 11353  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001303_01458.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH136 36 553 2.7e-110 0.9918533604887984
CBM32 1132 1263 9.4e-18 0.9274193548387096
CBM32 910 1037 1e-17 0.9112903225806451

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00754 F5_F8_type_C 4.61e-14 909 1037 3 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754 F5_F8_type_C 1.55e-13 1132 1263 3 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam00754 F5_F8_type_C 5.34e-11 708 822 10 127
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd00057 FA58C 3.24e-07 1121 1266 4 142
Substituted updates: Jan 31, 2002
cd00057 FA58C 3.54e-06 909 1041 15 143
Substituted updates: Jan 31, 2002

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRO38181.1 0.0 1 1425 1 1425
QBF74993.1 0.0 1 1425 1 1425
QMW76217.1 0.0 1 1339 1 1325
QIB55915.1 0.0 1 1339 1 1325
QUH27719.1 9.29e-81 1 553 1 505

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7V6M_A 3.47e-53 30 553 2 574
ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
7V6I_A 2.22e-29 31 559 8 612
ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000318 0.998974 0.000190 0.000176 0.000165 0.000144

TMHMM  Annotations      download full data without filtering help

start end
1401 1420