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CAZyme Information: MGYG000001306_00047
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phocaeicola coprocola | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola coprocola | |||||||||||
| CAZyme ID | MGYG000001306_00047 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | Beta-galactosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 13440; End: 14801 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam18565 | Glyco_hydro2_C5 | 9.78e-12 | 349 | 422 | 12 | 93 | Glycoside hydrolase family 2 C-terminal domain 5. Domain 5 is found in dimeric beta-D-galactosidase from Paracoccus sp. 32d, which contributes to stabilization of the functional dimer. It is suggested that the location of this domain 5, may be one of the factors responsible for the creation of a functional dimer and cold-adaptation of this enzyme. |
| COG3250 | LacZ | 1.82e-09 | 2 | 62 | 351 | 411 | Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]. |
| pfam02836 | Glyco_hydro_2_C | 8.53e-08 | 1 | 65 | 65 | 143 | Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. |
| pfam16355 | DUF4982 | 1.84e-05 | 247 | 325 | 3 | 62 | Domain of unknown function (DUF4982). This family is found in the C-terminal of uncharacterized proteins and beta-galactosidases around 680 residues in length from various Bacteroides species. The function of this protein is unknown. |
| PRK10340 | ebgA | 1.01e-04 | 2 | 64 | 385 | 456 | cryptic beta-D-galactosidase subunit alpha; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QRO23836.1 | 2.44e-275 | 1 | 424 | 393 | 816 |
| ALJ42839.1 | 1.02e-274 | 1 | 424 | 394 | 817 |
| BCA49329.1 | 1.02e-274 | 1 | 424 | 394 | 817 |
| QUT42691.1 | 2.90e-274 | 1 | 424 | 394 | 817 |
| QMW86990.1 | 2.90e-274 | 1 | 424 | 394 | 817 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5EUV_A | 3.04e-12 | 1 | 421 | 310 | 716 | ChainA, Beta-D-galactosidase [Paracoccus sp. 32d],5EUV_B Chain B, Beta-D-galactosidase [Paracoccus sp. 32d],5LDR_B Chain B, Beta-D-galactosidase [Paracoccus sp. 32d] |
| 5LDR_A | 3.04e-12 | 1 | 421 | 311 | 717 | ChainA, Beta-D-galactosidase [Paracoccus sp. 32d] |
| 7CWD_A | 1.23e-10 | 1 | 422 | 344 | 788 | ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans] |
| 4YPJ_A | 2.14e-10 | 1 | 423 | 350 | 795 | ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans] |
| 5T98_A | 3.77e-10 | 1 | 397 | 357 | 780 | Crystalstructure of BuGH2Awt [Bacteroides uniformis],5T98_B Crystal structure of BuGH2Awt [Bacteroides uniformis],5T99_A Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis],5T99_B Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P77989 | 1.12e-32 | 1 | 421 | 333 | 723 | Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2 |
| P26257 | 6.26e-21 | 1 | 391 | 334 | 709 | Beta-galactosidase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=lacZ PE=1 SV=1 |
| T2KM09 | 3.16e-10 | 2 | 382 | 373 | 758 | Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2 |
| A7LXS9 | 6.65e-06 | 1 | 422 | 377 | 835 | Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000072 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |