CAZyme Information: MGYG000001306_00393

Basic Information

• Species: Phocaeicola coprocola
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola coprocola
• CAZyme ID: MGYG000001306_00393
• CAZy Family: PL1
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
542		59094.06	4.4395

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001306	4295617	Isolate	not provided	not provided

• Gene Location: Start: 148245; End: 149873 Strand: -

Full Sequence      

MNRNFKRILFSACLLAALGGTACSDDTPEQPAGGGTESGETEEPGGEDNPDGPLQMDPVE
FAAFPGAEGYGKNTVGGRGGKVYHVTSLDDDANNPAEGTLRWVLKQKGAKTVVFDVAGTI
HLKADLKTNNDNLTIAGQTSPGGICLADYAFVINSNEVIIRFLRFRPGDDSGKEPDGLGG
MDKKNIIIDHCSVSWSVDECFSVYGMENSTVQWCIAAQALRVSVHGKGTHCYGGNWGGNK
ASYHHNLIAHCESRVPRLGPRPSTQLNEYVDIRNNVFYNWAGEGCYGAENQNINIVDNYY
KPGPATNSGKETDRIRYRIAKIGVRTLDYVTEDDGSYNDWYPSLHKWGTFYVTGNVVEGH
DDVTADNWTKGIYAQQENGSKVDNLWTEETMKAIRKESPVVDPVMTTEHSAQEAYQAVLN
YAGACNYRDAIDELVLSDVKEGKATCTASGNKPGYINEPEDVLQALSELGDNPYPELAKD
TSRDVTDTDGDGMPDAFETAYGLDANNPDDGNANTLDPAGKYTNLEMYLHSLVQDIIKKQ
QQ

Enzyme Prediction     

No EC number prediction in MGYG000001306_00393.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL1	117	300	1.1e-74	0.994535519125683

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
smart00656	Amb_all	1.30e-07	111	300	3	186	Amb_all domain.
COG3866	PelB	3.03e-05	58	258	34	236	Pectate lyase [Carbohydrate transport and metabolism].
pfam00544	Pec_lyase_C	4.19e-04	154	300	58	211	Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QDH54493.1	6.84e-229	1	540	1	511
QGT73510.1	1.19e-228	6	540	2	507
ALJ48964.1	1.69e-228	6	540	2	507
QRQ55774.1	1.69e-228	6	540	2	507
QDM11680.1	1.69e-228	6	540	2	507

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1PXZ_A	2.99e-07	67	194	25	169	ChainA, Major pollen allergen Jun a 1 [Juniperus ashei],1PXZ_B Chain B, Major pollen allergen Jun a 1 [Juniperus ashei]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
B8NQQ7	2.08e-46	61	533	20	414	Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83	1.45e-44	61	533	20	414	Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q5B297	1.42e-42	53	535	12	413	Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q4WL88	3.18e-39	61	533	21	415	Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B0XMA2	4.38e-39	61	533	21	415	Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000105	0.084858	0.914906	0.000044	0.000053	0.000037

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001306_00393.