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CAZyme Information: MGYG000001306_01803

You are here: Home > Sequence: MGYG000001306_01803

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola coprocola
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola coprocola
CAZyme ID MGYG000001306_01803
CAZy Family CBM62
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
662 76215.34 8.2535
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001306 4295617 Isolate not provided not provided
Gene Location Start: 39967;  End: 41955  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001306_01803.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM62 458 527 3.8e-20 0.5267175572519084
CBM62 534 594 2.8e-16 0.4580152671755725

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01841 Transglut_core 0.003 195 286 9 102
Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQR19037.1 2.01e-219 13 661 18 671
ANU59567.1 2.01e-219 13 661 18 671
QQA08332.1 1.27e-212 13 661 18 671
ALJ44269.1 2.99e-209 13 661 41 695
QDM10989.1 9.77e-205 16 661 22 673

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2YB7_A 7.20e-06 464 530 74 141
ChainA, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YB7_B Chain B, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YFU_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YFZ_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus],2YG0_A Chain A, Carbohydrate Binding Family 6 [Acetivibrio thermocellus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000953 0.312802 0.685643 0.000190 0.000209 0.000191

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001306_01803.