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CAZyme Information: MGYG000001306_02698

You are here: Home > Sequence: MGYG000001306_02698

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola coprocola
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola coprocola
CAZyme ID MGYG000001306_02698
CAZy Family GH3
CAZyme Description Xylan 1,4-beta-xylosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
499 55900.11 8.1347
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001306 4295617 Isolate not provided not provided
Gene Location Start: 146383;  End: 147882  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37 3.2.1.- 3.2.1.21 3.2.1.55

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 62 303 2.1e-73 0.9768518518518519

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN03080 PLN03080 3.23e-90 30 432 44 460
Probable beta-xylosidase; Provisional
COG1472 BglX 9.26e-81 60 430 53 391
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK15098 PRK15098 1.57e-79 5 439 2 459
beta-glucosidase BglX.
pfam00933 Glyco_hydro_3 1.40e-56 42 336 42 316
Glycosyl hydrolase family 3 N terminal domain.
pfam01915 Glyco_hydro_3_C 8.68e-12 376 433 1 59
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDO67855.1 2.37e-315 1 499 1 499
QRQ47317.1 2.73e-315 1 499 1 500
QUT46491.1 3.88e-315 1 499 1 500
ALJ59400.1 4.78e-315 1 499 1 499
QUT89559.1 4.78e-315 1 499 1 499

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7VC6_A 4.51e-69 30 424 17 422
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC7_A 4.51e-69 30 424 17 422
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
5A7M_A 6.42e-58 37 428 51 445
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
5AE6_A 6.50e-58 37 428 51 445
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5AE6_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]
6Q7I_A 1.51e-57 37 428 51 444
GH3exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7I_B GH3 exo-beta-xylosidase (XlnD) [Aspergillus nidulans FGSC A4],6Q7J_A Chain A, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4],6Q7J_B Chain B, Exo-1,4-beta-xylosidase xlnD [Aspergillus nidulans FGSC A4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 1.70e-90 28 474 24 477
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
Q94KD8 1.30e-86 34 413 50 435
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
Q9SGZ5 2.49e-86 32 424 42 450
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
Q9FGY1 2.53e-80 32 426 53 451
Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1
Q9LXD6 9.86e-78 30 446 51 481
Beta-D-xylosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BXL3 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000243 0.999171 0.000164 0.000136 0.000133 0.000128

TMHMM  Annotations      download full data without filtering help

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