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CAZyme Information: MGYG000001306_03048

You are here: Home > Sequence: MGYG000001306_03048

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola coprocola
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola coprocola
CAZyme ID MGYG000001306_03048
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
732 MGYG000001306_60|CGC3 83774.91 7.7094
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001306 4295617 Isolate not provided not provided
Gene Location Start: 243819;  End: 246017  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001306_03048.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 64 352 1.6e-97 0.9965277777777778
CE19 402 730 1e-29 0.858433734939759

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09492 Pec_lyase 2.59e-95 64 353 1 289
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
TIGR02474 pec_lyase 7.21e-95 64 352 1 289
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
COG0412 DLH 2.70e-21 441 706 1 197
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism].
pfam12715 Abhydrolase_7 4.71e-16 401 719 45 351
Abhydrolase family. This is a family of probable bacterial abhydrolases.
COG1506 DAP2 9.18e-13 435 689 358 579
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37157.1 0.0 2 729 3 730
QDU41600.1 1.04e-113 26 363 51 390
QDT46035.1 8.12e-113 26 359 51 386
QDU80650.1 3.28e-106 26 365 48 389
BAV08751.1 4.36e-92 18 364 22 383

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1R76_A 5.25e-51 48 362 78 407
ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A 2.03e-39 57 344 37 314
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 2.46e-38 57 344 37 314
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]
3G8Y_A 1.21e-14 401 719 46 352
ChainA, SusD/RagB-associated esterase-like protein [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34973 9.11e-28 407 727 2 299
Putative hydrolase YtaP OS=Bacillus subtilis (strain 168) OX=224308 GN=ytaP PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001598 0.997080 0.000635 0.000238 0.000214 0.000211

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001306_03048.