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CAZyme Information: MGYG000001309_00113

You are here: Home > Sequence: MGYG000001309_00113

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_F botulinum_A
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium_F; Clostridium_F botulinum_A
CAZyme ID MGYG000001309_00113
CAZy Family GT83
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
759 MGYG000001309_1|CGC2 82183.38 9.8102
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001309 4102125 Isolate not provided not provided
Gene Location Start: 141707;  End: 143986  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001309_00113.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT83 10 228 3e-31 0.39444444444444443

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1807 ArnT 2.08e-55 33 705 33 531
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].
pfam13231 PMT_2 7.91e-44 66 224 1 160
Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.
pfam06800 Sugar_transport 7.47e-04 70 111 157 197
Sugar transport protein. This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins, ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes. These members are transmembrane proteins which are usually 5+5 duplications. This model recognizes a set of five TMs,
COG1287 Stt3 7.88e-04 65 224 85 212
Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones].
pfam02516 STT3 0.001 57 227 57 241
Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes, OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone, rather than in an OTase complex, and is required for N-glycosylation of asparagines.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUB37647.1 5.40e-69 16 697 210 777
QHU89858.1 4.41e-68 9 701 271 890
QHU92512.1 5.61e-62 31 701 291 887
QHU90800.1 4.92e-61 31 701 293 887
QJU05422.1 1.76e-60 31 701 293 891

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5EZM_A 6.42e-08 66 229 87 255
CrystalStructure of ArnT from Cupriavidus metallidurans in the apo state [Cupriavidus metallidurans CH34],5F15_A Crystal Structure of ArnT from Cupriavidus metallidurans bound to Undecaprenyl phosphate [Cupriavidus metallidurans CH34]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34575 1.97e-123 10 714 9 678
Putative mannosyltransferase YkcB OS=Bacillus subtilis (strain 168) OX=224308 GN=ykcB PE=3 SV=2
P37483 2.45e-118 5 708 2 659
Putative mannosyltransferase YycA OS=Bacillus subtilis (strain 168) OX=224308 GN=yycA PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.944823 0.027488 0.001713 0.000139 0.000109 0.025750

TMHMM  Annotations      download full data without filtering help

start end
13 32
52 74
86 108
112 134
141 158
171 193
206 228
398 415
428 447
451 473
485 507
512 534
555 577