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CAZyme Information: MGYG000001317_00387

You are here: Home > Sequence: MGYG000001317_00387

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Citrobacter portucalensis_A
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter portucalensis_A
CAZyme ID MGYG000001317_00387
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1048 MGYG000001317_6|CGC3 118767.51 5.6151
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001317 5150259 Isolate not provided not provided
Gene Location Start: 193672;  End: 196818  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 57 911 1.5e-220 0.964095744680851

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK09525 lacZ 0.0 11 1042 8 1025
beta-galactosidase.
PRK10340 ebgA 0.0 26 1041 5 997
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 1.53e-161 64 910 14 803
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836 Glyco_hydro_2_C 1.25e-100 347 631 1 302
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
smart01038 Bgal_small_N 2.50e-88 762 1041 5 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QPR56267.1 0.0 1 1047 1 1047
ASG86676.1 0.0 1 1046 1 1046
SQH92060.1 0.0 1 1046 1 1046
SQH38960.1 0.0 1 1046 1 1046
ASO09041.1 0.0 1 1046 1 1046

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6SD0_A 9.07e-250 21 1043 1 982
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
6S6Z_A 1.24e-249 22 1043 1 981
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
3DEC_A 9.94e-205 32 1040 14 995
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 7.12e-197 32 1045 17 1002
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
3MUZ_1 1.65e-175 1 1037 12 1045
E.Coli(lacZ) beta-galactosidase (R599A) in complex with IPTG [Escherichia coli K-12],3MUZ_2 E.Coli (lacZ) beta-galactosidase (R599A) in complex with IPTG [Escherichia coli K-12],3MUZ_3 E.Coli (lacZ) beta-galactosidase (R599A) in complex with IPTG [Escherichia coli K-12],3MUZ_4 E.Coli (lacZ) beta-galactosidase (R599A) in complex with IPTG [Escherichia coli K-12],3MV0_1 E. COLI (lacZ) BETA-GALACTOSIDASE (R599A) IN COMPLEX WITH D-GALCTOPYRANOSYL-1-ONE [Escherichia coli K-12],3MV0_2 E. COLI (lacZ) BETA-GALACTOSIDASE (R599A) IN COMPLEX WITH D-GALCTOPYRANOSYL-1-ONE [Escherichia coli K-12],3MV0_3 E. COLI (lacZ) BETA-GALACTOSIDASE (R599A) IN COMPLEX WITH D-GALCTOPYRANOSYL-1-ONE [Escherichia coli K-12],3MV0_4 E. COLI (lacZ) BETA-GALACTOSIDASE (R599A) IN COMPLEX WITH D-GALCTOPYRANOSYL-1-ONE [Escherichia coli K-12],3MV1_1 E.Coli (lacZ) beta-galactosidase (R599A) in complex with Guanidinium [Escherichia coli K-12],3MV1_2 E.Coli (lacZ) beta-galactosidase (R599A) in complex with Guanidinium [Escherichia coli K-12],3MV1_3 E.Coli (lacZ) beta-galactosidase (R599A) in complex with Guanidinium [Escherichia coli K-12],3MV1_4 E.Coli (lacZ) beta-galactosidase (R599A) in complex with Guanidinium [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56307 4.96e-249 21 1043 1 982
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847 3.64e-241 12 1032 14 1021
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q9K9C6 5.13e-198 25 1032 10 1001
Beta-galactosidase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lacZ PE=3 SV=1
A5F5U6 9.04e-187 61 1043 46 1018
Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=lacZ PE=3 SV=2
Q6LL68 1.77e-184 64 1042 48 1026
Beta-galactosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000046 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001317_00387.