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CAZyme Information: MGYG000001317_02302

You are here: Home > Sequence: MGYG000001317_02302

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Citrobacter portucalensis_A
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter; Citrobacter portucalensis_A
CAZyme ID MGYG000001317_02302
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1048 MGYG000001317_10|CGC2 118753.76 5.6828
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001317 5150259 Isolate not provided not provided
Gene Location Start: 49449;  End: 52595  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001317_02302.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 3 588 3.1e-56 0.586436170212766

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 1.39e-15 6 442 10 428
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam00754 F5_F8_type_C 6.85e-13 925 1022 6 111
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
PRK10340 ebgA 7.72e-11 81 419 113 449
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 3.70e-08 107 419 153 462
beta-galactosidase.
cd00057 FA58C 4.33e-08 924 1025 17 130
Substituted updates: Jan 31, 2002

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QMR44598.1 0.0 1 1040 1 1042
ASA20759.1 1.50e-284 2 1040 4 1057
AIQ52150.1 2.71e-276 7 1042 8 1058
QUI21604.1 2.32e-257 6 1040 3 1036
QJW86919.1 2.32e-211 10 1040 3 1021

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6D89_A 3.95e-07 6 379 34 379
Bacteroidesuniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_B Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_C Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_D Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q47077 2.36e-18 89 419 136 463
Beta-galactosidase OS=Enterobacter cloacae OX=550 GN=lacZ PE=3 SV=1
Q2XQU3 3.62e-17 89 419 136 463
Beta-galactosidase 2 OS=Enterobacter cloacae OX=550 GN=lacZ PE=3 SV=1
A3FEW8 1.25e-15 89 419 136 463
Beta-galactosidase OS=Enterobacter agglomerans OX=549 GN=lacZ PE=1 SV=2
A4W7D2 6.42e-15 89 419 136 463
Beta-galactosidase OS=Enterobacter sp. (strain 638) OX=399742 GN=lacZ PE=3 SV=1
A6T8X0 2.22e-13 93 422 145 472
Beta-galactosidase 1 OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) OX=272620 GN=lacZ1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000062 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001317_02302.