CAZyme Information: MGYG000001318_02040

Basic Information

• Species: Enterobacter cancerogenus
• Lineage: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter cancerogenus
• CAZyme ID: MGYG000001318_02040
• CAZy Family: PL9
• CAZyme Description: Pectate disaccharide-lyase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
698	MGYG000001318_9|CGC14	74965.98	5.8522

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001318	4633453	Isolate	not provided	not provided

• Gene Location: Start: 789447; End: 791543 Strand: -

Full Sequence      

MNAYLPLSLMICCAFAATAAEQPVWKAITFGQSTDLNFSSNVLPEKIGVNDVTLDGKTLT
SQETADLSKPITIESRGGKIANAHDGLTFFYTELPAKENFVLQATVRVDQFGPENGAKPA
AQEGAGLMVRDILGVPRQQPLKEGYEEFPAASNLVMNAIMTQDKKDHHRVKLQAITREGI
SHPWGDAGAAINKQSYKEEIDITQTPAFRLKLVRTNDGFITAWAPAGSDAWISKSVPRAD
LIAVQNQNSYYVGFFASRNAKITVSDASLTTSEASTVASEPWQAKALPVVVQRASASKSA
SERYLVQARANYDGVFSVRQNEVVIGSDKQVKAGEMYVVPTTLTQNATFSLTFTPTSGTP
VQQAFSVEKVNGIEPAVIHVSPEGGADGQGTPASPMAFATAISMVSPGGKIILAAGDYPR
TEIPLTASGSEGKMTLLQAEGKTVIHGLLVNANYWHIKGIEVTDKSLRVQGSHNLIEKVT
AYRNDDTGIQISSPENIGRPLWASFNRVIDSESWGNEDPGKINADGFAVKMRVGEGNRLE
NCYAHDNIDDGFDLFNKIEDGANGIVTIENSLARNNTSNGFKLGGEGQPVAHVIRNSKAI
GNHLDGFTDNFNPGALVVANNVATDNQRFNFIFRPSPYGDASTQGVFTGNKSVRTAPGKY
DDAVVGNIDATNYFIVKGESVNNSGKRLPDGASLITQR

Enzyme Prediction     

EC	4.2.2.9

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL9	376	676	3.8e-95	0.8746666666666667

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13229	Beta_helix	4.16e-07	446	622	1	157	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	2.27e-04	459	626	2	137	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam14592	Chondroitinas_B	0.001	393	551	2	143	Chondroitinase B. This family includes chondroitinases. These enzymes cleave the glycosaminoglycan dermatan sulfate.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AUJ83702.1	0.0	1	698	1	698
QGG10304.1	0.0	1	698	1	698
QZY36907.1	0.0	1	698	1	698
CAD5360121.1	0.0	1	698	1	698
QSW35495.1	0.0	1	698	1	699

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1RU4_A	3.96e-33	377	626	16	292	ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A	4.38e-09	379	637	6	331	Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P22751	9.22e-288	17	675	26	688	Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1
P0C1A6	3.94e-33	377	626	41	317	Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7	3.29e-32	377	626	41	317	Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000238	0.999088	0.000215	0.000153	0.000141	0.000134

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001318_02040.