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CAZyme Information: MGYG000001321_02455

You are here: Home > Sequence: MGYG000001321_02455

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Desulfovibrio piger
Lineage Bacteria; Desulfobacterota; Desulfovibrionia; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio; Desulfovibrio piger
CAZyme ID MGYG000001321_02455
CAZy Family GT2
CAZyme Description Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsE
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1039 MGYG000001321_47|CGC2 111872.42 4.8173
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001321 2826258 Isolate not provided not provided
Gene Location Start: 242669;  End: 245788  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001321_02455.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00833 PKS 0.0 13 435 3 421
polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
COG3321 PksD 0.0 9 980 2 966
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism].
smart00825 PKS_KS 1.55e-137 13 437 1 298
Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
smart00827 PKS_AT 1.71e-123 541 842 1 298
Acyl transferase domain in polyketide synthase (PKS) enzymes.
TIGR02813 omega_3_PfaA 1.17e-100 7 837 3 891
polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAY90071.1 1.86e-216 13 894 1213 2096
BAY30132.1 8.88e-216 13 894 1216 2099
BAZ00088.1 6.65e-214 13 894 1214 2097
BAZ75991.1 6.65e-214 13 894 1214 2097
AFY93865.1 1.90e-208 7 896 955 1867

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4MZ0_A 3.29e-212 13 892 41 937
ChainA, CurL [Moorena producens 3L],4MZ0_B Chain B, CurL [Moorena producens 3L]
7VEE_A 2.28e-178 10 893 20 914
ChainA, Polyketide synthase [Streptomyces graminofaciens],7VEF_A Chain A, Polyketide synthase [Streptomyces graminofaciens]
4WKY_A 3.40e-165 5 507 1 499
Streptomcyesalbus JA3453 oxazolomycin ketosynthase domain OzmN KS2 [Streptomyces albus],4WKY_B Streptomcyes albus JA3453 oxazolomycin ketosynthase domain OzmN KS2 [Streptomyces albus]
7S6B_A 1.06e-156 4 892 51 933
ChainA, Polyketide synthase [Streptomyces lasalocidi],7S6B_B Chain B, Polyketide synthase [Streptomyces lasalocidi]
2QO3_A 2.14e-154 7 916 2 897
CrystalStructure of [KS3][AT3] didomain from module 3 of 6-deoxyerthronolide B synthase [Saccharopolyspora erythraea],2QO3_B Crystal Structure of [KS3][AT3] didomain from module 3 of 6-deoxyerthronolide B synthase [Saccharopolyspora erythraea]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q7TXL6 1.46e-196 8 905 3 923
Phenolphthiocerol/phthiocerol polyketide synthase subunit E OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=ppsE PE=1 SV=1
P9WQE1 1.46e-196 8 905 3 923
Phenolphthiocerol/phthiocerol polyketide synthase subunit E OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=ppsE PE=1 SV=1
P9WQE0 1.46e-196 8 905 3 923
Phenolphthiocerol/phthiocerol polyketide synthase subunit E OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=ppsE PE=3 SV=1
Q9ZGI5 1.34e-170 13 892 2606 3559
Narbonolide/10-deoxymethynolide synthase PikA1, modules 1 and 2 OS=Streptomyces venezuelae OX=54571 GN=pikAI PE=1 SV=1
G3XNF4 3.85e-168 2 892 609 1527
PKS-NRPS hybrid synthetase ATPKS OS=Aspergillus niger (strain ATCC 1015 / CBS 113.46 / FGSC A1144 / LSHB Ac4 / NCTC 3858a / NRRL 328 / USDA 3528.7) OX=380704 GN=ATPKS PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.998319 0.000717 0.000979 0.000005 0.000002 0.000008

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001321_02455.