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CAZyme Information: MGYG000001322_00594

You are here: Home > Sequence: MGYG000001322_00594

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gemmiger variabilis
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger variabilis
CAZyme ID MGYG000001322_00594
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
717 MGYG000001322_10|CGC3 78890.27 5.1551
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001322 3237471 Isolate not provided not provided
Gene Location Start: 204642;  End: 206795  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.37 3.2.1.- 3.2.1.21 3.2.1.55

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 37 278 8.6e-74 0.9814814814814815

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN03080 PLN03080 4.74e-160 14 686 52 769
Probable beta-xylosidase; Provisional
PRK15098 PRK15098 1.72e-136 18 686 41 751
beta-glucosidase BglX.
COG1472 BglX 3.45e-79 30 380 47 368
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915 Glyco_hydro_3_C 1.72e-64 349 586 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933 Glyco_hydro_3 6.57e-57 40 308 63 315
Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CCG34879.1 0.0 10 709 12 710
BCJ97911.1 0.0 7 702 10 705
BCJ94359.1 0.0 6 711 9 714
QHQ61918.1 0.0 11 716 13 720
ADX05682.1 0.0 11 707 13 707

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7VC7_A 2.10e-111 14 700 25 732
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
7VC6_A 2.10e-111 14 700 25 732
ChainA, xylan 1,4-beta-xylosidase [Phanerodontia chrysosporium]
5Z87_A 1.24e-102 40 695 120 777
ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
6R5I_A 2.98e-92 40 697 69 732
ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]
5A7M_A 1.19e-91 11 701 49 757
ChainA, BETA-XYLOSIDASE [Trichoderma reesei],5A7M_B Chain B, BETA-XYLOSIDASE [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5EY15 3.07e-160 12 691 32 851
Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
Q9SGZ5 1.19e-139 14 689 48 760
Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BXL7 PE=2 SV=2
Q94KD8 2.47e-127 13 686 53 750
Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
Q9LJN4 5.30e-126 11 688 48 760
Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana OX=3702 GN=BXL5 PE=2 SV=2
Q9FGY1 2.42e-125 14 686 59 762
Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000037 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001322_00594.