CAZyme Information: MGYG000001328_03459

Basic Information

• Species: Clostridium tertium
• Lineage: Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium tertium
• CAZyme ID: MGYG000001328_03459
• CAZy Family: GH0
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
468	MGYG000001328_4|CGC4	52608.44	4.9115

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001328	3807822	Isolate	not provided	not provided

• Gene Location: Start: 143894; End: 145300 Strand: +

Full Sequence      

MAQKGRLKVQSFVNESYIPVENTRIVIRPSVGGPETKEIVLSTNSMGESEIIELDAPPLE
YSQQPTGQVPYSMYDLRVEREGFQSIVINRCQIFPDELAIQPCYLIESLNRSYRNETINV
PPNTSNVSPTAPGGSVVEIINIGPNVLNGNYPEKIPEEEEKPLPPPTSGVVLQKPVVPEF
IVVHAGGPNNTSAPNYRVPYKDYIKNVASCEIYSTWSENTIRSNIYAIVSFTLNRIYTEW
YRGKGKNFDITNSTAYDHAFTYGRNIFESISEVVDDIFATYVRRVGRKQPLLTQYCDGKN
VSCPGWMTQWGSKYLGDQGKTPFEILTNFYGSDIELVTADQVKGVPKSYPGYDLVIGSSG
QEVRIIQEFLNRISQNYPLIPKVAQDGIYGANTAEAVRVFQGVFNLPKTGVVDYATWYKI
SDVYVGVTRIAELRGSARSVQRIFVPPRSFDNYYDPTIPKFDYMDDMV

Enzyme Prediction     

No EC number prediction in MGYG000001328_03459.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam01471	PG_binding_1	5.10e-13	359	420	1	57	Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409	PGRP	5.20e-07	354	420	39	102	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409	PGRP	1.05e-04	339	420	106	183	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QBJ74211.1	3.37e-266	1	465	1	444
AYE34395.1	5.57e-265	1	463	1	442
QAS59800.1	5.57e-265	1	463	1	442
ASW42008.1	3.47e-259	1	467	1	454
QSW20651.1	7.31e-234	1	463	1	437

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000040	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001328_03459.