CAZyme Information: MGYG000001332_00590

Basic Information

• Species: Massilioclostridium methylpentosum
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium methylpentosum
• CAZyme ID: MGYG000001332_00590
• CAZy Family: GH78
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1466		158939.28	4.0594

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001332	3406391	Isolate	not provided	not provided

• Gene Location: Start: 639196; End: 643596 Strand: -

Full Sequence      

MKKTNKAVSLLVSFALLLAVVLPAISVVGAENAAQWLELAGASSSSNANGSLVPENLIDA
SGDTFWSSAISAEYSEKGEFASVSVPGTALVSKMAITPRKGFTSTFPKDFKLQYSVDKKT
WLDIPGQSYTGYTPSSDSEQVFEFDTPIEAKQLRILGTRFGVDDFNTHYMQLAEIRVFGS
ITAPPNAPIWGSSPIREPYDYVADGSFSGDEQPASPDPLVSYRWDNPTAEDDLEIFLRKP
VKAETDQPSSFSGVDTLTSEQTAVTVTGEGTICLDFGVEYAAWLEIDSPDLSGEITLGVS
EYNEPAFVNSGPKSPSKTAKPVQYGDTYRLELNDELYEGVRFGFINVTSFDKPFTITGVR
LVCQTKPVNYNGSFDSDNEMLNKIWYTAAYDVRANLKKDYFAAILVDRGDRHSWTGDAYT
AQASALAAFGNFDFVLDNLRYTSQRSNGIESYELYWILSLIDYYEYTGDKDGVRSLLSEA
TGRLDHAYSIWGTNPNLGFFGWDERLGAGFENPNIPENQVSYKLLSIQAWKEFSEVLSSI
GEDALAQTYAGYAETKTNELLSDPSWSEACGLHGFSDAINAGVISQEQMQDISSTYFYDR
VNRLSYSPFNQYFILQAMGEAGEYDQAISSILDLWGGQISYGGTTFFETYRPQWNDVIGT
NAPVPNNQAGYTSLAHPWSAGVLPWMSEQILGIHATTPGFETFAVLPHLGRQLTRVSGSI
LTPYGTIEASFDTSTGECSVTVPEGTTADVGIPKVEKKITGVWVNGRMQEISSEDEEFVL
LKALPAGSYDIQVTYEGETPAFEELETEYDAEFVGTDEQTQGNWGGVYGSEGYVLCSYNG
ASNDLRVLPDYVSGIRYSKAMTTQWSEGTDDVRAPASNALNGGDRRVGALYSNDPVACWQ
TFTVDIELNQERPYTVALYFVDWDNGGRELAVEMFDLDTLDMVAPVQVVDDYAGGKYLVY
QFDKSVRFRIDQMRGPNATLSGIFFGEGMGDTPVILTETVDDQNPVVSYEGSWTHDPMPG
AYANTFSYSNVAGNNASFTFEGSGISFLSSLESNRGLAEIVLDGVSQGKIDLYSAAAVRQ
SEVFRADNLSPGQHTIQVLVTGEKNPAAVGAYVDVDAFVVRNRVETPGSVAKALTVTQPQ
QGETQLTMPVVPDGFEVSLTASSDEAVISLSGAITPQETEREVELTFTVSKDGLSAQAVR
TVTVPARPVVAETDKTILEKVIAYAEQAKAGSEYQGAIASVRASFDAALTAAQTVCGNAS
ATQTEIDSAWISLMEQIHRLGFQAGDKTQLTSLVAYAQSLDLTQYVEAGQEALTTALQTA
QECLDDGDALQGDVEQAAEDLLNALLSLRLKADKSLLAQALSQASLIDSNAYTPASVETF
NRAQAEAEQVMNNPSLTAEEDQAVVDAAAESLLAAMRGLVRVDGAVRGIQETAQAQRSPA
TGETLPAAAALLLLAAGACLMFRKEK

Enzyme Prediction     

No EC number prediction in MGYG000001332_00590.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	266	750	2.1e-74	0.9900793650793651

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam00754	F5_F8_type_C	6.55e-11	53	158	13	113	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam17389	Bac_rhamnosid6H	1.64e-09	372	686	4	336	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	3.69e-07	692	753	1	64	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
cd00057	FA58C	1.36e-06	56	156	27	127	Substituted updates: Jan 31, 2002
COG4372	COG4372	3.14e-05	1206	1436	69	316	Uncharacterized conserved protein, contains DUF3084 domain [Function unknown].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QEC76313.1	7.14e-271	208	985	53	843
QGA24541.1	1.84e-268	178	985	14	819
QMW04815.1	2.94e-259	191	985	29	815
ACT93515.1	1.81e-245	191	985	46	830
ATP56756.1	6.97e-236	211	989	42	821

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3CIH_A	4.98e-27	245	763	168	715	Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P0DTR4	5.73e-14	840	1099	492	756	A type blood N-acetyl-alpha-D-galactosamine deacetylase OS=Flavonifractor plautii OX=292800 PE=1 SV=1
T2KM26	1.24e-07	373	758	732	1142	Bifunctional sulfatase/alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22250 PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000903	0.998239	0.000212	0.000228	0.000191	0.000190

TMHMM  Annotations     

start	end
7	29