CAZyme Information: MGYG000001332_00600

Basic Information

• Species: Massilioclostridium methylpentosum
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium methylpentosum
• CAZyme ID: MGYG000001332_00600
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1278		137501.69	3.8868

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001332	3406391	Isolate	not provided	not provided

• Gene Location: Start: 668214; End: 672050 Strand: -

Full Sequence      

MINIRQKLLSLILAAALTMGTISGGLLTASAAGETATGSFAQSFADPSAAQSMKVRTWWP
SADIDPEMIWQEVKEIKQAGFGCIELIGITEGYLSDAVDAERYGWSSEGWNDSVEVLIEA
AEHYGISVDLTIGPRWPAGVPGLDLNSDASSKKLAASTTHFTVDGQPQNSFAIPSAPANA
ASDPQLVTIVVAQTSGTLEGASEYGIDETTLQVIDDAAIDLQNGTFSWTPGEQGEWTIFA
YYSVATGQTSGDTSPTAYVIDHFSLEGTQAILDYWDNHMMTDEIREHFAQYGGNMFEDSL
ELTGVDLPWSTALESYFTQNLGYDIKQYLPLIMGQFSVRGGSNEKYTAADSKMQEELFSD
YFNNLSDMYIENHIKVVQEWCAGHNIKYRAQAQGTSDNGWVDSIEAASYLDVAEGESLGM
AKCPDSFRSLAGAANMGGTELVSVELGATFGGSYQVTWQMLLELLNRTASAGANQFVLHG
FPTQSQQCSKNKWPGWQPFDDPKFSEAWNNRQPSWDYMKEGFVDYVSRLQTFLQYGSADV
DFAVYRADLGIRTDEGYTKGVLYLDGNVPGDNPVTDRGYSYNYISPGNFALDTAVVENGV
FNPDYAGYRALVINNEQSMELSAAQQILTYAKAGLPIILVGTTPVKDGTYSTDADNEVQA
IFAELSALSTTVSIAEEDDLPAALAQLGILPSVRYSSPVKLAAQHRVSDKADLYYLYNHS
TSDDYASNDIYHDDAAAITTTLTLEGTGQPYSLNPWTGEITPILAYTDNGNGTISLDVTV
QDSEVLLIGITSDTTLFGEFDLVSAANNSGVGQLLYEDGRVVYRTTEPTSYDVTVGGETI
TGSVDEVASPFALNDWTLTVTSYEPGDNAQNDVYDTKKVELGPYSLNGLTDWSQIEGLEN
SSGQGLYTATFIVEGDCDGALLDLGATYDNILEVTLNGSVLPNVDQYNPTLDLGRFLTEG
ENTLTVRTGTTLAKAVRASGGYANARDAYASFPTTYGLLGGVTVTPYRDVVVSVPEDQQA
DKSILNKVIAYAEEEAESEAFDNVIQDVQVSFAAALKDAQMVAANIGATQQEVDAAWQSL
MTEIHKLGFVRGDKTGLGELIELANSFNAQIDRYTPATAQPFAEALADANTVYADGNAMQ
EDVETAESTLLNAMMNLRYRADKSVLEAVLAQAAELDTTAFTAQSVATFNTANEEAKAVY
GNENAQQEEVNAAADNLSVAIDSLVAVGAETEGETVRGDIAMTTASGNAKTGDSAPAAVA
FALLALVSTGFVWNKKKK

Enzyme Prediction     

No EC number prediction in MGYG000001332_00600.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	41	787	9.7e-95	0.7815533980582524

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	2.07e-27	224	763	364	869	alpha-L-rhamnosidase.
pfam07554	FIVAR	0.008	1166	1225	3	69	FIVAR domain. This domain is found in a wide variety of contexts, but mostly occurring in cell wall associated proteins. A lack of conserved catalytic residues suggests that it is a binding domain. From context, possible substrates are hyaluronate or fibronectin (personal obs: C Yeats). This is further evidenced by. Possibly the exact substrate is N-acetyl glucosamine. Finding it in the same protein as pfam05089 further supports this proposal. It is found in the C-terminal part of Bacillus sp. Gellan lyase, which is removed during maturation. Some of the proteins it is found in are involved in methicillin resistance. The name FIVAR derives from Found In Various Architectures.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ALC24789.1	1.20e-144	38	1020	59	1021
QMU12900.1	1.20e-144	38	1020	59	1021
QFY07470.1	3.41e-141	17	1009	14	967
ADI12183.1	6.26e-139	54	1013	58	982
QIY75684.1	4.49e-138	5	1009	14	993

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KNA8	5.32e-11	54	718	42	679	Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.010248	0.982236	0.001445	0.005285	0.000450	0.000305

TMHMM  Annotations     

start	end
9	31
1255	1274