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CAZyme Information: MGYG000001332_01093

You are here: Home > Sequence: MGYG000001332_01093

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Massilioclostridium methylpentosum
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium methylpentosum
CAZyme ID MGYG000001332_01093
CAZy Family GH29
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1718 MGYG000001332_11|CGC6 186217.11 4.2362
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001332 3406391 Isolate not provided not provided
Gene Location Start: 1312359;  End: 1317515  Strand: +

Full Sequence      Download help

MMKSFLKKLL  AAAVVAAMAA  QAVSVSAAAV  ADDLSVQAPD  PYGPLPNAMQ  LQYHQEELSA60
FCHFGMNTFT  NKEWGNGQEN  PEWFNPTGFH  PEEWVKQLQD  AGFKRLIVTA  KHHDGFCIWP120
SEYTEHDVAS  SPYKDGKGDI  LAEISKACTD  LNMDMGCYLS  PWDENAESYG  YYDANGNPCS180
PEEDVLDYNE  YYINQIKEIT  SNPIYGNNGR  FVEWWMDGAK  GTGADAQEYR  MDDFLATIRE240
GEPGVQIFGG  GNSGGIHWIG  NENGIAPDET  WAQRGEYWSV  PECDVSLISG  WFWHPNYPAK300
SMEQMANIYF  SSVGHGAPLL  LNVPPNRDGR  YDQAHASRIA  EFGKAIEETF  DEDLTQKDGV360
TATASAVRGN  AAQFDASKTI  DGKEDTYWTM  DDGQLTGSVT  VNLGKEQTFD  VVSIEEYIEL420
GQRISSFKVE  YRSGNGEWKD  FGSGKTISAK  RLVRRSPVKA  DQVRVTITGS  KAVPLLRTIG480
VYKAGAGFEV  SSPFPNDLTL  IDNPSFDKNG  TWYDESGSFV  NNTSMWCNAG  ASASFTFTGT540
QAWIIGTIDP  NHGIMTVQID  DMDPVDVNTQ  SSPRKLQQIL  YTTPVLENGP  HTVTMTCKTK600
ALGLDAAYVL  DNDGAGMFEL  EKANYSVNEG  GTVDITINRV  GGSKGEATLL  ISTPPGKAVQ660
GQYYVDINET  LTFADGETSK  TVTVETIDNN  VKTGSLNFFF  ELTAATNAII  GFTPRAEIII720
IDDEMAQELQ  NAIAQADALI  EAHYLPDSWA  TMLAAKAHAQ  NVLENSATMT  ETQINAATNG780
LLSAIQALVK  RTNYTAEDPF  MFPGRDDEAK  LLEAEFFDMH  PAVDDNKHVH  VTNKAEASNG840
QEVNWFMSDD  SISVPYRALA  AGTYTVTMTY  RSGRLNESTA  NAVTWSGDNI  VPGNVKVFGE900
SGATTYHTVS  FDIEITKAGY  SVLTIGSMQE  GSVSEGPVID  KFEVAPKELE  LATYYINATA960
GEGGSIEPSG  EVPVEQFSSK  TFTIKPDADH  SLGTVKVNGK  SVGSVDSYTF  ENIQGDATIE1020
ATFDKNIAKK  AVIVTASNQH  SATYSGDKAV  DGNPDTRWAT  QDSVTKEAWL  ELSFAEPVTV1080
DTAYFSQLTG  ANNRTNAYNI  EYWADGEWQV  GYTGGSIGAT  ATVRFEAFTA  DRIRFHITDG1140
FRPSFWEFQL  FNEKRPSKTV  QEVAEELTMA  NPDKGATKIT  MPAVPGGFAI  ELTATSNFNV1200
IDTFGNINAP  AEPTDVDLTF  TVSKNGESAS  KTLTVTVLPN  SIKGDNLSPT  ATNVTASNFH1260
SAPYSPDKAT  DGNASTRWAT  NDSVTTAWLM  MEFDEPITIG  SAYIKEMNNA  NNHIDGYNIE1320
YWVEDGTASD  GENGHWEIAY  TGGAVNGETN  VSFASVTSNK  IRLNLTKANR  PSIYEFQVYS1380
ETIVPPVEVA  DRTILNKVIE  KATALKDSEE  FANAISSVQE  SFLAALDEAI  RVANTNTSTP1440
EQVQNAWIAL  MTEIHKLGLQ  QGNKDLLREH  YELYSQLDLD  LYIDDDAKAN  FITALENAAA1500
MLENNDAVQS  EVDAVDNALV  VAADALTKRG  DKTTLQALVD  QSAGFVEENY  AKGWAEFAEA1560
LEKANIVLDN  ANATQDDVNV  AVDELLTAML  NLRFKADKTL  LNNAIAAAEA  LDLSGFSAES1620
VEKFNASLAA  AKATAADDSL  SEEEQNVVDK  ALSDLNEAVK  GLTNTNGTSA  NLEINGDGSI1680
VKTTSGAKTG  DSAPLALAVA  TLLLAGAAVS  FGKKRRNK1718

Enzyme Prediction      help

No EC number prediction in MGYG000001332_01093.

CAZyme Signature Domains help

Created with Snap851712573434295156016877738599441030111612021288137414601546163221346GH29
Family Start End Evalue family coverage
GH29 21 346 5.8e-63 0.9364161849710982

CDD Domains      download full data without filtering help

Created with Snap851712573434295156016877738599441030111612021288137414601546163238482AfuC83349Alpha_L_fucos84344Alpha_L_fucos615703Calx_beta615703Calx-beta
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3669 AfuC 2.25e-75 38 482 3 430
Alpha-L-fucosidase [Carbohydrate transport and metabolism].
smart00812 Alpha_L_fucos 8.49e-29 83 349 75 340
Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.
pfam01120 Alpha_L_fucos 2.20e-28 84 344 79 326
Alpha-L-fucosidase.
smart00237 Calx_beta 5.25e-13 615 703 1 90
Domains in Na-Ca exchangers and integrin-beta4. Domain in Na-Ca exchangers and integrin subunit beta4 (and some cyanobacterial proteins)
pfam03160 Calx-beta 4.71e-12 615 703 1 91
Calx-beta domain.

CAZyme Hits      help

Created with Snap8517125734342951560168777385994410301116120212881374146015461632351105QHB23055.1|GH29351105QEI30547.1|GH29351105QRT29448.1|GH29351105PLT74914.1|GH29|3.2.1.111361045SLK22631.1|GH29
Hit ID E-Value Query Start Query End Hit Start Hit End
QHB23055.1 4.24e-259 35 1105 55 1161
QEI30547.1 4.24e-259 35 1105 55 1161
QRT29448.1 4.35e-259 35 1105 55 1161
PLT74914.1 1.30e-248 35 1105 55 1157
SLK22631.1 4.65e-238 36 1045 44 1077

PDB Hits      download full data without filtering help

Created with Snap8517125734342951560168777385994410301116120212881374146015461632355026TR3_A355026TR4_A414836ORG_A414836OR4_A414836ORF_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6TR3_A 1.95e-147 35 502 17 523
Ruminococcusgnavus GH29 fucosidase E1_10125 in complex with fucose [[Ruminococcus] gnavus E1]
6TR4_A 2.67e-146 35 502 17 523
Ruminococcusgnavus GH29 fucosidase E1_10125 D221A mutant in complex with fucose [[Ruminococcus] gnavus E1],6TR4_B Ruminococcus gnavus GH29 fucosidase E1_10125 D221A mutant in complex with fucose [[Ruminococcus] gnavus E1]
6ORG_A 2.57e-117 41 483 6 449
Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORG_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
6OR4_A 3.15e-116 41 483 6 449
Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6OR4_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_A Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]
6ORF_A 3.25e-116 41 483 6 449
Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORF_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Created with Snap851712573434295156016877738599441030111612021288137414601546163239482sp|Q8GW72|FUCO1_ARATH39482sp|Q7XUR3|FUCO1_ORYSJ82351sp|C3YWU0|FUCO_BRAFL84160sp|P17164|FUCO_RAT44160sp|Q60HF8|FUCO_MACFA
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8GW72 5.78e-94 39 482 31 477
Alpha-L-fucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=FUC1 PE=1 SV=2
Q7XUR3 3.74e-83 39 482 33 476
Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560400 PE=3 SV=2
C3YWU0 3.74e-08 82 351 95 350
Alpha-L-fucosidase OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_56888 PE=3 SV=2
P17164 4.68e-07 84 160 106 180
Tissue alpha-L-fucosidase OS=Rattus norvegicus OX=10116 GN=Fuca1 PE=1 SV=1
Q60HF8 8.24e-07 44 160 50 186
Tissue alpha-L-fucosidase OS=Macaca fascicularis OX=9541 GN=FUCA1 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000313 0.999042 0.000160 0.000178 0.000151 0.000136

TMHMM  Annotations      download full data without filtering help

start end
1693 1712