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CAZyme Information: MGYG000001332_01306

You are here: Home > Sequence: MGYG000001332_01306

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Massilioclostridium methylpentosum
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium methylpentosum
CAZyme ID MGYG000001332_01306
CAZy Family CBM67
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1569 MGYG000001332_12|CGC1 171693.33 4.1649
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001332 3406391 Isolate not provided not provided
Gene Location Start: 48775;  End: 53484  Strand: -

Full Sequence      Download help

MGLLDKSDWQ  AEWIELGKEG  DDLPAPVNYS  IDLDFRVISK  AAGIVFGAKD  ANNFLMWQFH60
VQPDDGSGIA  KFRPHQWVNG  MPACIDEIDI  SQTIPESDKY  TPHHLTIEVQ  GNQIITSVDG120
TEVNRREHDM  AEYGKIGIRQ  GGDEKAAFDN  IVVKNTDTGE  MLFSEDFSAP  KSTFSIGTVT180
NGELEVINAV  GLADDSVDSA  PMYRKDFTVS  GEVKSARLYA  TALGIYEFSI  NGSKVGDNYF240
APTWTAYDYN  PNYQNYVMYQ  TYDVTEMLQS  GENAIGAITG  HGWYSGNQFL  SGPNIYGTGS300
VLYGQLEIEY  ANGDKQIIPT  DTSWQVTGNG  PILSDDYHDG  EIYDATREIA  GWDEPGFTPD360
KNWTSAAKYV  YHSVANPDNY  TSIYEGQEGY  PYGVIAQVGP  TVKQIEERVP  VSITQPSPGT420
YIFDMGENVV  GFARLNIRGE  AGTTVKLRFA  EMLNDASGTG  DGPEGTLYTA  NLRSAKATDY480
YTMKGDPEGE  IYQPRFTYHG  FRYVELTGYE  GEVTEDTVTG  IVLSGVQEQI  GSYETSNELI540
NQYQNAIVRS  EKGNFLDGPQ  GCPQRDERMP  YTGDGQIFAM  TSAMNMDVNQ  FLRKFMLDIT600
TNQRENGDVA  MWAPNFVPIG  GIGLGGDFGK  SGWGDAVIIF  PWTLYQAYGD  TQIIRENYDA660
MKKFIGWYQS  LTSGDSLIVS  AGLGDWLYLE  KDTPQDVIST  AYFAYCCDLL  SKMAAAIGET720
EDANTYHQMF  LEISEQYQEQ  FISDNGMVKG  DTQTAYLLTL  QYGLVSNTEQ  QAKVAQQLVE780
NIKAHNWHLT  TGFLGVEWLL  PVLSDNGYSD  VAYKLLLQEG  YPSWLYTVKN  GATSIWERWN840
SYTLEHGFGE  VAMNSYNHVV  FGSVGEWFYH  YSAGIRNQDG  AAGYKEIVID  PQVDDRLEFV900
NASYDSRYGT  IVSNWNLKDN  KLSMTVEIPA  NTTAEIYVPA  KDVDSVTESG  IAATEAEGLT960
FVKMEDGKAV  FQAGSGRYEF  RSTLEVTHTL  TLSNESAAAG  NMVSINGGEW  ITLPYQAKCK1020
DGEALSLRFQ  PVNYVDYKIA  SISGNYTSET  DSISIPMTSD  TSLTVKNEEI  NRENLALGMS1080
VNANSSIDQG  SGWNKAFLTD  GQKVSNPSSY  GYTSLNFASP  DVDVWVEIDL  GKDVEFNRIQ1140
MYPRTDVATA  DGKAASFPSD  FSIQIRKNGS  PSYETVGSYS  DYSTPVSRNI  AEVFQFDSTL1200
TARYVRINVS  KMGEPPAGEP  YYFQLAELGI  YKEQLPVVVD  KTALQAAIDE  AAEYEGQQDA1260
YTEESWMRFS  DALQAANEIN  EDASAGQDMV  DAAAKELCDA  IAGLTRKPVE  PTDIDRTILE1320
KVLDYAKQAK  AGSEYAGVIA  SVKESFDAAY  AQAENIYQDG  TATQEQINRA  WMILMKEIHK1380
LGFQAGDKAQ  LELLISEAEA  LDLSLYVPAG  QAEFSNAVAN  AKGCYYDGDA  LEGDVEQAVD1440
ALLEAMLNLR  YKADKGVLKS  ALAKAAEIDT  ASYSAQSVAA  FEAANTAAKA  INDNANATQA1500
EVDGAVDRLN  AAIDGLVKVD  AVPEKGNTAI  AGDATRATGN  AKTGDAASTA  AVAVMALACA1560
ASILSRKKK1569

Enzyme Prediction      help

No EC number prediction in MGYG000001332_01306.

CAZyme Signature Domains help

Created with Snap781562353133924705496277067848629411019109811761255133314121490413937GH78198370CBM67
Family Start End Evalue family coverage
GH78 413 937 8.6e-167 0.996031746031746
CBM67 198 370 1.8e-33 0.8806818181818182

CDD Domains      download full data without filtering help

Created with Snap781562353133924705496277067848629411019109811761255133314121490528871Bac_rhamnosid6H211406Bac_rhamnosid_N414524Bac_rhamnosid874950Bac_rhamnosid_C10821209F5_F8_type_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 2.30e-114 528 871 1 339
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531 Bac_rhamnosid_N 3.44e-56 211 406 1 172
Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam05592 Bac_rhamnosid 5.80e-39 414 524 1 102
Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390 Bac_rhamnosid_C 2.82e-22 874 950 1 75
Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam00754 F5_F8_type_C 3.87e-10 1082 1209 1 112
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits      help

Created with Snap78156235313392470549627706784862941101910981176125513331412149011253SDT43572.1|GH782980SCG46613.1|GH782980AVT31775.1|GH782980AVT37932.1|GH78194984QYJ14957.1|CBM0|GH78
Hit ID E-Value Query Start Query End Hit Start Hit End
SDT43572.1 3.99e-313 1 1253 109 1327
SCG46613.1 1.08e-237 2 980 146 1073
AVT31775.1 3.73e-230 2 980 148 1076
AVT37932.1 2.80e-229 2 980 148 1076
QYJ14957.1 6.35e-218 194 984 262 1003

PDB Hits      download full data without filtering help

Created with Snap7815623531339247054962770678486294110191098117612551333141214902129803W5M_A2009806I60_A1959466GSZ_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3W5M_A 1.84e-189 212 980 315 1028
CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6I60_A 6.51e-126 200 980 176 939
Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
6GSZ_A 2.50e-124 195 946 126 854
Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap781562353133924705496277067848629411019109811761255133314121490212980sp|Q82PP4|RHA78_STRAW169982sp|T2KNB2|PLH20_FORAG199988sp|P9WF03|RHA78_ALTSL199979sp|T2KPL4|PLH28_FORAG12251445sp|E8MGH9|HYBA2_BIFL2
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q82PP4 6.97e-189 212 980 315 1028
Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KNB2 9.27e-153 169 982 134 922
Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03 8.95e-129 199 988 168 916
Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
T2KPL4 1.74e-86 199 979 183 946
Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1
E8MGH9 2.36e-12 1225 1445 1648 1871
Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000074 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001332_01306.