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CAZyme Information: MGYG000001332_01308

You are here: Home > Sequence: MGYG000001332_01308

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Massilioclostridium methylpentosum
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium methylpentosum
CAZyme ID MGYG000001332_01308
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1284 MGYG000001332_12|CGC1 140558.56 4.1098
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001332 3406391 Isolate not provided not provided
Gene Location Start: 54339;  End: 58193  Strand: -

Full Sequence      Download help

MKSANWWKKC  LAALLSAALI  SSCVGSAGVF  AAGDASTGEP  TLAEEFQNAP  QQSRTMIRYW60
LPDAAVEEEE  VRRDIQTIAE  LGYGGIEVMG  LTMLTSGVTD  DYRWGTENWD  RAMEVVVDEA120
KKQGLTVDVT  NGPGWPISMP  GIETADDEAA  SYEMTYGTAI  VAGGERYTGV  VPARNQVRKS180
GTTKLFAVAA  YRVAGDKTVD  YSSYIDLMPS  VALNEQDPAQ  STLDWTAPDG  EDWMVFSFWE240
QPTAQQYGGK  YYIVDHFGRA  GAQACIDYWE  QVLEEKNYLH  EVSSIFNDSL  EYQVDKEWTR300
GFQEIFEQQK  DYDITPYLPV  IGGTGYYQTG  EGPNFSFTDS  ELTQRIKNDY  NDVVTYCYNE360
YHLKPLQQMA  EKHGMNIRYQ  VAYNKPMEVE  TSALSVGIPE  GEGLNRATLD  NLRMMASAVH420
MTDKQIYSFE  AAAEFGNANG  QSYEDMAWWL  KRSWAAGMNR  QVLHGASYSG  VWEDGTLNGR480
FGGTSWPGWS  GFSGFISNDW  NRNTSEENAG  SYIEYFSRYN  YIMQKESKID  VAVYRHTYED540
RYMLSGNDGE  DWYPDGGALN  ANGYSYEFVS  PSILSLDTAK  VTNGVLNENG  PAYKAIVLAN600
EERMSPSTLD  TLTEMVEAGL  KLVVVGDTPS  KLMYQSELNE  GYTDAMIVDG  MASLCENGNV660
RQVADYADVP  AALAALGVTA  DAQYSTPTDI  LARHQVDEIG  DYYYLYNYNK  MLAEDANATL720
ATAGTGYPGI  NKEMAFSEKD  VEVTLKGEGR  PYLLDGWTGE  ITPIASYQLN  NGSVTLKLSF780
DEDEAKLIAL  LTDEEAQANG  ITPRSSYVTA  LDSSSQAVYT  DQGEIALRAS  EEGRHTATLS840
NGTQCAASVE  EVQQSFTVGA  WDLQISAIEP  GEGSIYFRDS  VWNQLEPTTV  TSLAGWSEIN900
PDWKNVSGIG  RYTATFTLDK  GWEQGYGATI  ALGEVEDTYT  VEVNGTQLPF  TNQINTTLDI960
GPYVHQGENT  IVVTVASTLY  NQFKAHGGMM  SSMPLKQNGL  LGVNGVVRVT  PYQQVVFEAD1020
TSKEILNKVL  AYAQQQYEDP  SFEQVIAVVQ  ETFTAALESA  RAVAADPYAT  QQEIDAAWQT1080
LMTEIHKLGF  VRGDKTSLAT  LLEVATQYEV  KIDSYTPTTA  DQFVAVLAEA  RETYADENAM1140
QDDVSAAESD  LLEAMMNLRY  KADKGVLESV  LAKASEIDLA  GYTAESRAAF  QTANDNARAV1200
YEDENATQDE  VNSAADRLHA  AIDRLEATDA  ASGSIVGEGA  SIQGDATRTN  GSATAKTGET1260
TPVAALVAVL  ALAGAGLIVS  KKKR1284

Enzyme Prediction      help

No EC number prediction in MGYG000001332_01308.

CAZyme Signature Domains help

Created with Snap64128192256321385449513577642706770834898963102710911155121943797GH106
Family Start End Evalue family coverage
GH106 43 797 5.6e-81 0.787621359223301

CDD Domains      download full data without filtering help

Created with Snap641281922563213854495135776427067708348989631027109111551219193707Glyco_hydro_106884975Glyco_hydro_2_N11671226FIVAR11211257antiphage_ZorA_1
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 2.10e-24 193 707 342 837
alpha-L-rhamnosidase.
pfam02837 Glyco_hydro_2_N 6.49e-05 884 975 41 133
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
pfam07554 FIVAR 8.00e-04 1167 1226 3 69
FIVAR domain. This domain is found in a wide variety of contexts, but mostly occurring in cell wall associated proteins. A lack of conserved catalytic residues suggests that it is a binding domain. From context, possible substrates are hyaluronate or fibronectin (personal obs: C Yeats). This is further evidenced by. Possibly the exact substrate is N-acetyl glucosamine. Finding it in the same protein as pfam05089 further supports this proposal. It is found in the C-terminal part of Bacillus sp. Gellan lyase, which is removed during maturation. Some of the proteins it is found in are involved in methicillin resistance. The name FIVAR derives from Found In Various Architectures.
NF033914 antiphage_ZorA_1 0.006 1121 1257 351 501
anti-phage defense protein ZorA. Proteins of this subfamily are putative H+ channel proteins, but it has been reported that they are also involved in anti-phage defense.

CAZyme Hits      help

Created with Snap641281922563213854495135776427067708348989631027109111551219421018AND79497.1|GH106431022ALC24789.1|GH106431022QMU12900.1|GH106541012QFY07470.1|GH106541019QKW37235.1|GH106
Hit ID E-Value Query Start Query End Hit Start Hit End
AND79497.1 1.97e-143 42 1018 36 1002
ALC24789.1 1.95e-127 43 1022 62 1018
QMU12900.1 1.95e-127 43 1022 62 1018
QFY07470.1 4.02e-126 54 1012 47 965
QKW37235.1 2.46e-121 54 1019 60 984

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000595 0.390637 0.608013 0.000312 0.000233 0.000183

TMHMM  Annotations      download full data without filtering help

start end
11 33
1261 1280