CAZyme Information: MGYG000001332_01308

Basic Information

• Species: Massilioclostridium methylpentosum
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium methylpentosum
• CAZyme ID: MGYG000001332_01308
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1284	MGYG000001332_12|CGC1	140558.56	4.1098

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001332	3406391	Isolate	not provided	not provided

• Gene Location: Start: 54339; End: 58193 Strand: -

Full Sequence      

MKSANWWKKCLAALLSAALISSCVGSAGVFAAGDASTGEPTLAEEFQNAPQQSRTMIRYW
LPDAAVEEEEVRRDIQTIAELGYGGIEVMGLTMLTSGVTDDYRWGTENWDRAMEVVVDEA
KKQGLTVDVTNGPGWPISMPGIETADDEAASYEMTYGTAIVAGGERYTGVVPARNQVRKS
GTTKLFAVAAYRVAGDKTVDYSSYIDLMPSVALNEQDPAQSTLDWTAPDGEDWMVFSFWE
QPTAQQYGGKYYIVDHFGRAGAQACIDYWEQVLEEKNYLHEVSSIFNDSLEYQVDKEWTR
GFQEIFEQQKDYDITPYLPVIGGTGYYQTGEGPNFSFTDSELTQRIKNDYNDVVTYCYNE
YHLKPLQQMAEKHGMNIRYQVAYNKPMEVETSALSVGIPEGEGLNRATLDNLRMMASAVH
MTDKQIYSFEAAAEFGNANGQSYEDMAWWLKRSWAAGMNRQVLHGASYSGVWEDGTLNGR
FGGTSWPGWSGFSGFISNDWNRNTSEENAGSYIEYFSRYNYIMQKESKIDVAVYRHTYED
RYMLSGNDGEDWYPDGGALNANGYSYEFVSPSILSLDTAKVTNGVLNENGPAYKAIVLAN
EERMSPSTLDTLTEMVEAGLKLVVVGDTPSKLMYQSELNEGYTDAMIVDGMASLCENGNV
RQVADYADVPAALAALGVTADAQYSTPTDILARHQVDEIGDYYYLYNYNKMLAEDANATL
ATAGTGYPGINKEMAFSEKDVEVTLKGEGRPYLLDGWTGEITPIASYQLNNGSVTLKLSF
DEDEAKLIALLTDEEAQANGITPRSSYVTALDSSSQAVYTDQGEIALRASEEGRHTATLS
NGTQCAASVEEVQQSFTVGAWDLQISAIEPGEGSIYFRDSVWNQLEPTTVTSLAGWSEIN
PDWKNVSGIGRYTATFTLDKGWEQGYGATIALGEVEDTYTVEVNGTQLPFTNQINTTLDI
GPYVHQGENTIVVTVASTLYNQFKAHGGMMSSMPLKQNGLLGVNGVVRVTPYQQVVFEAD
TSKEILNKVLAYAQQQYEDPSFEQVIAVVQETFTAALESARAVAADPYATQQEIDAAWQT
LMTEIHKLGFVRGDKTSLATLLEVATQYEVKIDSYTPTTADQFVAVLAEARETYADENAM
QDDVSAAESDLLEAMMNLRYKADKGVLESVLAKASEIDLAGYTAESRAAFQTANDNARAV
YEDENATQDEVNSAADRLHAAIDRLEATDAASGSIVGEGASIQGDATRTNGSATAKTGET
TPVAALVAVLALAGAGLIVSKKKR

Enzyme Prediction     

No EC number prediction in MGYG000001332_01308.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	43	797	5.6e-81	0.787621359223301

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	2.10e-24	193	707	342	837	alpha-L-rhamnosidase.
pfam02837	Glyco_hydro_2_N	6.49e-05	884	975	41	133	Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
pfam07554	FIVAR	8.00e-04	1167	1226	3	69	FIVAR domain. This domain is found in a wide variety of contexts, but mostly occurring in cell wall associated proteins. A lack of conserved catalytic residues suggests that it is a binding domain. From context, possible substrates are hyaluronate or fibronectin (personal obs: C Yeats). This is further evidenced by. Possibly the exact substrate is N-acetyl glucosamine. Finding it in the same protein as pfam05089 further supports this proposal. It is found in the C-terminal part of Bacillus sp. Gellan lyase, which is removed during maturation. Some of the proteins it is found in are involved in methicillin resistance. The name FIVAR derives from Found In Various Architectures.
NF033914	antiphage_ZorA_1	0.006	1121	1257	351	501	anti-phage defense protein ZorA. Proteins of this subfamily are putative H+ channel proteins, but it has been reported that they are also involved in anti-phage defense.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AND79497.1	1.97e-143	42	1018	36	1002
ALC24789.1	1.95e-127	43	1022	62	1018
QMU12900.1	1.95e-127	43	1022	62	1018
QFY07470.1	4.02e-126	54	1012	47	965
QKW37235.1	2.46e-121	54	1019	60	984

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as LIPO

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000595	0.390637	0.608013	0.000312	0.000233	0.000183

TMHMM  Annotations     

start	end
11	33
1261	1280