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CAZyme Information: MGYG000001332_01308

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Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Massilioclostridium methylpentosum
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium methylpentosum
CAZyme ID MGYG000001332_01308
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1284 MGYG000001332_12|CGC1 140558.56 4.1098
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001332 3406391 Isolate not provided not provided
Gene Location Start: 54339;  End: 58193  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001332_01308.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 43 797 5.6e-81 0.787621359223301

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 2.10e-24 193 707 342 837
pfam02837 Glyco_hydro_2_N 6.49e-05 884 975 41 133
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
pfam07554 FIVAR 8.00e-04 1167 1226 3 69
FIVAR domain. This domain is found in a wide variety of contexts, but mostly occurring in cell wall associated proteins. A lack of conserved catalytic residues suggests that it is a binding domain. From context, possible substrates are hyaluronate or fibronectin (personal obs: C Yeats). This is further evidenced by. Possibly the exact substrate is N-acetyl glucosamine. Finding it in the same protein as pfam05089 further supports this proposal. It is found in the C-terminal part of Bacillus sp. Gellan lyase, which is removed during maturation. Some of the proteins it is found in are involved in methicillin resistance. The name FIVAR derives from Found In Various Architectures.
NF033914 antiphage_ZorA_1 0.006 1121 1257 351 501
anti-phage defense protein ZorA. Proteins of this subfamily are putative H+ channel proteins, but it has been reported that they are also involved in anti-phage defense.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AND79497.1 1.97e-143 42 1018 36 1002
ALC24789.1 1.95e-127 43 1022 62 1018
QMU12900.1 1.95e-127 43 1022 62 1018
QFY07470.1 4.02e-126 54 1012 47 965
QKW37235.1 2.46e-121 54 1019 60 984

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

0.000595 0.390637 0.608013 0.000312 0.000233 0.000183

TMHMM  Annotations      download full data without filtering help

start end
11 33
1261 1280