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CAZyme Information: MGYG000001332_01584

You are here: Home > Sequence: MGYG000001332_01584

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Massilioclostridium methylpentosum
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium methylpentosum
CAZyme ID MGYG000001332_01584
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1302 MGYG000001332_15|CGC1 144149.14 4.2117
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001332 3406391 Isolate not provided not provided
Gene Location Start: 1524;  End: 5432  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001332_01584.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 44 828 3.5e-74 0.8143203883495146

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 1.90e-13 171 776 313 869
alpha-L-rhamnosidase.
pfam02837 Glyco_hydro_2_N 2.96e-06 919 991 61 133
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
PRK10340 ebgA 0.001 925 991 111 177
cryptic beta-D-galactosidase subunit alpha; Reviewed
TIGR01167 LPXTG_anchor 0.007 1274 1302 4 32
LPXTG-motif cell wall anchor domain. This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other]

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGH70002.1 7.19e-231 2 1044 43 1127
QYN20448.1 1.75e-208 18 1033 23 1115
SDG73971.1 6.37e-194 40 1031 3 955
SDS67158.1 1.83e-191 40 1004 3 944
QHC72677.1 2.95e-191 50 1004 14 938

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 1.96e-10 200 1000 402 1103
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000376 0.998783 0.000204 0.000229 0.000208 0.000180

TMHMM  Annotations      download full data without filtering help

start end
1278 1297