dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000001332_02332

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Basic Information help

Species

Massilioclostridium methylpentosum

Lineage

Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium methylpentosum

CAZyme ID

MGYG000001332_02332

CAZy Family

CBM67

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
2015		219442.08	4.2346

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001332	3406391	Isolate	not provided	not provided

Gene Location

Start: 123099; End: 129146 Strand: -

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000001332_02332.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH78	295	761	8.3e-85	0.9662698412698413
CBM67	45	253	2.8e-38	0.9943181818181818

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	4.04e-30	380	698	4	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam00754	F5_F8_type_C	1.28e-11	999	1126	1	120	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam17390	Bac_rhamnosid_C	2.27e-08	700	776	1	76	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam00754	F5_F8_type_C	3.51e-08	1253	1376	9	112	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
pfam17132	Glyco_hydro_106	1.14e-06	996	1133	172	299	alpha-L-rhamnosidase.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AXE90460.1	5.94e-240	43	1144	40	1120
AVV47733.1	8.31e-238	30	1403	4	1094
AYC36171.1	3.63e-236	43	1144	40	1120
QEV28934.1	5.99e-232	30	1144	29	1120
QJT00118.1	1.63e-231	30	1144	29	1120

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6I60_A	1.11e-23	41	815	143	940	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]

Swiss-Prot Hits help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000267	0.998751	0.000459	0.000199	0.000162	0.000146

TMHMM Annotations download full data without filtering help

start	end
7	29
1986	2008