CAZyme Information: MGYG000001337_01091

Basic Information

• Species: Bacteroides fragilis
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides fragilis
• CAZyme ID: MGYG000001337_01091
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
996	MGYG000001337_2|CGC18	109776.53	7.3959

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001337	5115082	Isolate	not provided	not provided

• Gene Location: Start: 676002; End: 678992 Strand: +

Full Sequence      

MLKQLLTVVFLLSAGTLWAQQAAGLLPVQEDTHCKEWVEQTLSRMKLKDKVGQLFVYTLA
PRADKDTEKLVGKLTRKFKVGAFLYSEGTVEDQANLTNYAQRQSKIPLMITFDGEWGLAM
RLENTPVFPRNAALGCISDNTLIEAYGQEVARELREIGAHVNFAPDADVNTNPENPVIHV
RSFGENPKTVAEKVIAYGRGLETGGILSVSKHFPGHGDTDVDSHQALPAVYYNRARLDSV
ELYPFKEAIQAGLGGVMVGHLQVPALEPDRITPSSLSHSIVTDLLRGELGFNGLVFTDAL
AMKGVAAESDVTVKALKAGNDMVLVQQNVEKAQESVVQAIKDGRLTMEEIDAKCRRILAY
KYRLGLSRRPMIPVDGLSDRIHTPEAQALVTKLRTSAVTVLGNYFQILPLTATKGEIAVL
TVGDEGSDASFIEGLRSELPLKTFRMDKNTGEEERRKIVKELGNYRRVVVCITVQDKEAG
EYRSFFAGFRPQAPVVYAFFTSYRALASLEEAAARSAAVVLAHSGEEDLQRYVADVILGK
ASATGRLSMRIGNTFAAGSGVDVISGSPAGIAPEDYGLKSYRLHRIDSVVAAGLAAKAFP
GCQVLVLRHGQPVYDKCFGTHSVTDTTPVRATDLFDLASLTKTSATLLAVMKLYDQGRIE
LTDAVSKYVPALRATNKKNITIRELLLHESGLVPYIRFYRDAIDEYSVTGPFTQGFVDEW
HHTRMGEYTYACSDFKFKKGLVSATKTSGHTLQIADGLWLDKKFKAAMMKSIAQSELDRK
RFVYSDIGFILLQQVVEAVTGKTLDAYLVSEFYRPMGLEHTLFQPLNRYKKADIMPTAAN
DYLRRQDLCGYVHDEAAAFMGGVSGNAGLFSTAQELGKIYQMILNEGELDGKRYLRPETC
RIFTTEKSAVSHRGLGYDKPNLKDPKANACASSAPASVYGHTGFTGTCAWVDPENDLVYI
FLSNRLCPDAWNGKLNSMKIRQAIQEVIYQSLYTPE

Enzyme Prediction     

No EC number prediction in MGYG000001337_01091.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	100	325	2e-60	0.9861111111111112

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG1472	BglX	3.17e-79	45	425	1	365	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933	Glyco_hydro_3	4.08e-77	47	358	2	314	Glycosyl hydrolase family 3 N terminal domain.
PRK03642	PRK03642	3.04e-52	572	965	29	395	putative periplasmic esterase; Provisional
pfam00144	Beta-lactamase	1.58e-47	586	966	1	309	Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.
COG1680	AmpC	8.91e-41	546	969	1	367	CubicO group peptidase, beta-lactamase class C family [Defense mechanisms].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CBW21153.1	0.0	1	996	1	996
ANQ62788.1	0.0	1	996	1	996
CUA17152.1	0.0	1	996	1	996
BAD47315.1	0.0	1	996	1	996
CAH06271.1	0.0	1	996	1	996

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6K5J_A	5.90e-64	45	403	11	378	Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
3BMX_A	4.71e-62	40	445	37	482	Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A	1.36e-61	40	445	11	456	ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A	2.47e-61	40	445	41	486	Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
3SQL_A	1.33e-51	80	395	58	380	CrystalStructure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQL_B Crystal Structure of Glycoside Hydrolase from Synechococcus [Synechococcus sp. PCC 7002],3SQM_A Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_B Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_C Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002],3SQM_D Crystal Structure of Glycoside Hydrolase from Synechococcus Complexed with N-acetyl-D-glucosamine [Synechococcus sp. PCC 7002]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P40406	2.58e-61	40	445	37	482	Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823	1.23e-47	81	410	66	425	Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
Q7WUL3	3.49e-46	37	414	18	402	Beta-N-acetylglucosaminidase/beta-glucosidase OS=Cellulomonas fimi OX=1708 GN=nag3 PE=1 SV=1
P77619	5.42e-42	572	965	29	395	Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli (strain K12) OX=83333 GN=yfeW PE=1 SV=2
Q8XBJ0	1.81e-41	572	965	29	395	Putative D-alanyl-D-alanine carboxypeptidase OS=Escherichia coli O157:H7 OX=83334 GN=yfeW PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000243	0.999126	0.000160	0.000168	0.000148	0.000138

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001337_01091.